MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-1271

Family name MIR-1271 (all species)
Seed UUGGCAC
Species House mouse (Mus musculus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1271  Cfa-Mir-1271  Cpo-Mir-1271  Dno-Mir-1271  Eca-Mir-1271  Ete-Mir-1271  Hsa-Mir-1271  Laf-Mir-1271  Mml-Mir-1271  Pab-Mir-1271  Rno-Mir-1271 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)		 chr13: 54578152-54578210 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAGCCUGAUACCCAGCACCCAGGUGAGUGCUUGGCACCUGGUAAGCACUCAGUAAGUAUUUGAUGAGUGCCUACUGUGUGCCAAGACAUUGUGCUGAGGCUUUUGGGGGGAUUUAGAG
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Structure
        10         20         30         40        50        
CCAGCCUGAUACCCAGCA-  -   GUG    -|       C     A       GUAAG 
                   CC CAG   AGUG CUUGGCAC UGGUA GCACUCA     U
                   GG GUC   UUAC GAACCGUG GUCAU CGUGAGU     A
GAGAUUUAGGGGGGUUUUC  A   GUG    A^       U     C       AGUUU 
       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
-   +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-1271_5p (predicted)
mirBase accessionNone
Sequence 
0- CUUGGCACCUGGUAAGCACUCA -22
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Star sequence

Mmu-Mir-1271_3p* (predicted)
mirBase accessionNone
Sequence 
36- AGUGCCUACUGUGUGCCAAGACA -59
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