MirGeneDB 3.0

MirGeneDB ID

Mml-Mir-1271

Family name MIR-1271 (all species)
Seed UUGGCAC
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-1271
Paralogues
Orthologues Bta-Mir-1271  Cfa-Mir-1271  Cpo-Mir-1271  Dno-Mir-1271  Eca-Mir-1271  Ete-Mir-1271  Hsa-Mir-1271  Laf-Mir-1271  Mmu-Mir-1271  Pab-Mir-1271  Rno-Mir-1271 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_003339765.3_Mmul_10_traces)
CM014341.1: 173814103-173814160 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCUCUGUAUCCCCAGCACCCAGAUCAGUGCUUGGCACCUAGCAAGCACUCAGUAAAUACUUGUUGAGUGCCUGCUAUGUGCCGGGCAUUGUGCUGAGGGCUUUGUGGGGAUCCAGAG
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Structure
        10         20         30        40        50        
ACCUCUGUAUCCCCAGCA-  -|  AU             C     A       GUAAA 
                   CC CAG  CAGUGCUUGGCAC UAGCA GCACUCA     U
                   GG GUC  GUUACGGGCCGUG AUCGU CGUGAGU     A
GAGACCUAGGGGUGUUUCG  A^  GU             U     C       UGUUC 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-1271_5p

mirBase accessionMIMAT0024315
Sequence
0- CUUGGCACCUAGCAAGCACUCA -22
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Proposed targets TargetScanVert: mml-miR-1271-5p
Co-mature sequence

Mml-Mir-1271_3p

mirBase accessionMIMAT0027108
Sequence
36- AGUGCCUGCUAUGUGCCGGGCA -58
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Proposed targets TargetScanVert: mml-miR-1271-3p