MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-1298

Family name MIR-1298 (all species)
Seed UCAUUCG
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1298  Cfa-Mir-1298  Cja-Mir-1298  Cpo-Mir-1298  Eca-Mir-1298  Hsa-Mir-1298  Laf-Mir-1298  Mml-Mir-1298  Mmr-Mir-1298  Mmu-Mir-1298  Ocu-Mir-1298  Pab-Mir-1298  Rno-Mir-1298 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980336: 11975080-11975153 [+] UCSC
Precursor
(pre-Mir +30nt flank)
CUGUGAGAGGAAAAUAUGAGGAGUUAAGAGUUCAUUCGGAUGUCCAGAUGUAUCCAAGUACCCCGUUAUUUGGCAAUAAAUACAUCUGGGCAACUGAUUGAACUUUUCGCUUUUCAUAACUCAACUGGAAUCCU
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Structure
        10          20        30        40        50        60      
CUGUGAGAGGAAAAUAU--|      U         U    A            UCCAAGUACCCCG 
                   GAGGAGU AAGAGUUCA UCGG UGUCCAGAUGUA             U
                   CUUUUCG UUUUCAAGU AGUC ACGGGUCUACAU             U
UCCUAAGGUCAACUCAAUA^      C         U    A            AAAUAACGGUUUA 
  130       120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ete-Mir-1298_5p
mirBase accessionNone
Sequence 
0- UUCAUUCGGAUGUCCAGAUGUA -22
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Star sequence

Ete-Mir-1298_3p* (predicted)
mirBase accessionNone
Sequence 
52- CAUCUGGGCAACUGAUUGAACU -74
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