MirGeneDB 2.1
MirGeneDB ID

Lch-Let-7-P2c4

Family name LET-7 (all species)
Seed GAGGUAG
Species Coelacanth (Latimeria chalumnae)
MiRBase ID
Paralogues Lch-Let-7-P1b  Lch-Let-7-P1c  Lch-Let-7-P1d  Lch-Let-7-P2a1  Lch-Let-7-P2a2  Lch-Let-7-P2a3  Lch-Let-7-P2a4  Lch-Let-7-P2b1  Lch-Let-7-P2b2  Lch-Let-7-P2b4  Lch-Let-7-P2c1  Lch-Let-7-P2c2  Lch-Let-7-P2c3 
Orthologues Aae-Let-7  Bge-Let-7  Bpl-Let-7  Cgi-Let-7  Cmi-Let-7-P2c4  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dpu-Let-7  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Hme-Let-7  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Mun-Let-7-P2c4  Npo-Let-7  Obi-Let-7  Ovu-Let-7  Pfl-Let-7  Pmi-Let-7  Sko-Let-7  Spu-Let-7  Tca-Let-7  Xbo-Let-7  Xla-Let-7-P2c4  Xtr-Let-7-P2c4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(LatCha1_add)		 JH126576.1: 2453770-2453844 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AGACUCACCAGAUAUGGACAGUCCACUGACUGAGGUAGUAGUUUGUGUAGUUAGAGGGUAGUGAUAUUGCCCAUUUGGAGAUAACUAUACAAUCUACUGCCUUGCCAGUGCUGUUCAGACGUAGCAACGAAGACU
Get precursor sequence
Structure
        10            20        30        40        50        60       
AGACUCACCAGAUAUGG----|   UC     ACU          U          AGAGGGUAGUGAUA 
                     ACAG  CACUG   GAGGUAGUAG UUGUGUAGUU              U
                     UGUC  GUGAC   UUCCGUCAUC AACAUAUCAA              U
UCAGAAGCAACGAUGCAGACU^   --     CG-          U          UAGAGGUUUACCCG 
   130       120         110        100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsNo
Mature sequence

Lch-Let-7-P2c4_5p (predicted)
mirBase accessionNone
Sequence 
0- UGAGGUAGUAGUUUGUGUAGUU -22
Get sequence
Star sequence

Lch-Let-7-P2c4_3p* (predicted)
mirBase accessionNone
Sequence 
54- CUAUACAAUCUACUGCCUUGC -75
Get sequence