MirGeneDB 2.1
MirGeneDB ID

Lch-Let-7-P2a2

Family name LET-7 (all species)
Seed GAGGUAG
Species Coelacanth (Latimeria chalumnae)
MiRBase ID
Paralogues Lch-Let-7-P1b  Lch-Let-7-P1c  Lch-Let-7-P1d  Lch-Let-7-P2a1  Lch-Let-7-P2a3  Lch-Let-7-P2a4  Lch-Let-7-P2b1  Lch-Let-7-P2b2  Lch-Let-7-P2b4  Lch-Let-7-P2c1  Lch-Let-7-P2c2  Lch-Let-7-P2c3  Lch-Let-7-P2c4 
Orthologues Aae-Let-7  Aca-Let-7-P2a2  Ami-Let-7-P2a2  Bge-Let-7  Bpl-Let-7  Bta-Let-7-P2a2  Cfa-Let-7-P2a2  Cgi-Let-7  Cli-Let-7-P2a2  Cmi-Let-7-P2a2  Cpi-Let-7-P2a2  Cpo-Let-7-P2a2  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dno-Let-7-P2a2  Dpu-Let-7  Dre-Let-7-P2a2a  Dre-Let-7-P2a2b  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Ete-Let-7-P2a2  Gga-Let-7-P2a2  Gja-Let-7-P2a2  Gmo-Let-7-P2a2a  Hme-Let-7  Hsa-Let-7-P2a2  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Loc-Let-7-P2a2  Mal-Let-7-P2a2a  Mal-Let-7-P2a2b  Mdo-Let-7-P2a2  Mml-Let-7-P2a2  Mmu-Let-7-P2a2  Mun-Let-7-P2a2  Npo-Let-7  Oan-Let-7-P2a2  Obi-Let-7  Ocu-Let-7-P2a2  Ovu-Let-7  Pbv-Let-7-P2a2  Pfl-Let-7  Pmi-Let-7  Rno-Let-7-P2a2  Sha-Let-7-P2a2  Sko-Let-7  Spt-Let-7-P2a2  Spu-Let-7  Sto-Let-7-P2a2  Tca-Let-7  Tgu-Let-7-P2a2  Tni-Let-7-P2a2a  Tni-Let-7-P2a2b  Xbo-Let-7  Xla-Let-7-P2a2c  Xla-Let-7-P2a2d  Xtr-Let-7-P2a2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(LatCha1_add)		 JH126738.1: 1666276-1666346 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UCUGCCUGAGAAUAUGACUGUCCUUUGGGGUGAGGUAGUAGGUUGUAUAGUUUUAGGGUUAUACCCUUGCUGUCAGAUAACUAUACAAUCUACUGUCUUUCCUGAAGUGGCUGUAAGAACAGCGCCAGGCA
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Structure
        10         20         30        40        50        60     
UCUGCCUGAGAAUAUGACU-   -|  UG   U   GU                UUAGGGUUAUAC 
                    GUC CUU  GGG GAG  AGUAGGUUGUAUAGUU            C
                    CGG GAA  CCU UUC  UCAUCUAACAUAUCAA            C
ACGGACCGCGACAAGAAUGU   U^  GU   -   UG                UAGACUGUCGUU 
 .       120       110       100         90        80        70
Deep sequencing
3' NTU Unknown
MotifsNo
Mature sequence

Lch-Let-7-P2a2_5p (predicted)
mirBase accessionNone
Sequence 
0- UGAGGUAGUAGGUUGUAUAGUU -22
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Star sequence

Lch-Let-7-P2a2_3p* (predicted)
mirBase accessionNone
Sequence 
50- CUAUACAAUCUACUGUCUUUC -71
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