MirGeneDB 2.1
MirGeneDB ID

Mal-Mir-219-P2a

Family name MIR-219 (all species)
Seed GAUUGUC
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-219-P2b  Mal-Mir-219-P3a  Mal-Mir-219-P3b 
Orthologues Aae-Mir-219  Aca-Mir-219-P2  Ami-Mir-219-P2  Bfl-Mir-219  Bge-Mir-219  Bla-Mir-219  Bta-Mir-219-P2  Bta-Mir-219-P2-as  Cfa-Mir-219-P2  Cfa-Mir-219-P2-as  Cgi-Mir-219  Cin-Mir-219  Cli-Mir-219-P2  Cmi-Mir-219-P2  Cpi-Mir-219-P2  Cpo-Mir-219-P2  Cpo-Mir-219-P2-as  Csc-Mir-219  Cte-Mir-219  Dan-Mir-219  Dma-Mir-219  Dme-Mir-219  Dmo-Mir-219  Dno-Mir-219-P2  Dno-Mir-219-P2-as  Dpu-Mir-219  Dre-Mir-219-P2a  Dsi-Mir-219  Dya-Mir-219  Esc-Mir-219  Ete-Mir-219-P2  Gga-Mir-219-P2  Gja-Mir-219-P2  Gmo-Mir-219-P2a  Hsa-Mir-219-P2  Hsa-Mir-219-P2-as  Isc-Mir-219  Lan-Mir-219  Lch-Mir-219-P2  Loc-Mir-219-P2  Mdo-Mir-219-P2  Mml-Mir-219-P2  Mml-Mir-219-P2-as  Mmu-Mir-219-P2  Mmu-Mir-219-P2-as  Mun-Mir-219-P2  Oan-Mir-219-P2  Obi-Mir-219  Ocu-Mir-219-P2  Ocu-Mir-219-P2-as  Ovu-Mir-219  Pbv-Mir-219-P2  Pfl-Mir-219  Pma-Mir-219-o2  Pmi-Mir-219  Rno-Mir-219-P2  Rno-Mir-219-P2-as  Sha-Mir-219-P2  Sko-Mir-219  Spt-Mir-219-P2  Spu-Mir-219  Sto-Mir-219-P2  Tca-Mir-219  Tgu-Mir-219-P2  Tni-Mir-219-P2a  Xbo-Mir-219  Xtr-Mir-219-P2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884763.1: 1243351-1243417 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUCUUGGCAAAAUAUAGAGUCUUUAGCGACUGAUUGUCCAAACGCAAUUCUUGAGUAAACUCAAAUUCAACCCCAAGAAUUGUGUAUGGACAUCUGUUGCUGCAGACUCACAUUCAUCACUGCUGCC
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Structure
        10          20        30        40        50        60   
AUCUUGGCAAAAUAUAG--|    U       U   U     A            AGUAAACUC 
                   AGUCU UAGCGAC GAU GUCCA ACGCAAUUCUUG         A
                   UCAGA GUCGUUG CUA CAGGU UGUGUUAAGAAC         A
CCGUCGUCACUACUUACAC^    C       U   -     A            CCCAACUUA 
     120       110       100         90        80        70
Deep sequencing
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CommentThe MIR-219 family shows substantial variation of arm-usage and is currently, across all species, considered a co-mature.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-219-P2a_5p
mirBase accessionNone
Sequence 
0- UGAUUGUCCAAACGCAAUUCUUG -23
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Co-mature sequence

Mal-Mir-219-P2a_3p
mirBase accessionNone
Sequence 
45- AGAAUUGUGUAUGGACAUCUGU -67
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