MirGeneDB 2.1
MirGeneDB ID

Mun-Mir-1-P4

Family name MIR-1 (all species)
Seed GGAAUGU
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-1-P1  Mun-Mir-1-P2  Mun-Mir-1-P3 
Orthologues Aae-Mir-1  Aca-Mir-1-P4  Ami-Mir-1-P4  Asu-Mir-1  Bfl-Mir-1  Bge-Mir-1  Bla-Mir-1  Cbr-Mir-1  Cel-Mir-1  Cgi-Mir-1  Cin-Mir-1  Cli-Mir-1-P4  Cmi-Mir-1-P4  Cpi-Mir-1-P4  Cte-Mir-1  Dan-Mir-1  Dma-Mir-1  Dme-Mir-1  Dmo-Mir-1  Dpu-Mir-1  Dsi-Mir-1  Dya-Mir-1  Esc-Mir-1  Gga-Mir-1-P4  Gja-Mir-1-P4c  Gja-Mir-1-P4d  Hme-Mir-1  Isc-Mir-1  Lan-Mir-1  Lch-Mir-1-P4  Lgi-Mir-1  Oan-Mir-1-P4  Obi-Mir-1  Ovu-Mir-1  Pbv-Mir-1-P4  Pfl-Mir-1  Pma-Mir-1-o4  Pmi-Mir-1  Sko-Mir-1  Spt-Mir-1-P4  Spu-Mir-1  Sto-Mir-1-P4  Tca-Mir-1  Tgu-Mir-1-P4  Xbo-Mir-1  Xla-Mir-1-P4a  Xla-Mir-1-P4b  Xtr-Mir-1-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(Mun_miRNA_loci)		 1-P4_LR594642.1:203283987-203284249: 101-163 [+]
Precursor
(pre-Mir +30nt flank)
CAGAGGAUGAAGAAUGUCCACCCUAAGAGCACAUACUUCUUUAUAUGCCCAUAGGUUCUGCUCUUUGGUUAUGGAAUGUUAAGAAGUAUGUAUUUUUGGGCUGGAGGCACCACAGGACCUUCU
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Structure
        10          20        30        40        50        60 
CAGAGGAUGAAGAAUGU--|  C        C           U    GC     GGUUCUG 
                   CCA CCUAAGAG ACAUACUUCUU AUAU  CCAUA       C
                   GGU GGGUUUUU UGUAUGAAGAA UGUA  GGUAU       U
UCUUCCAGGACACCACGGA^  C        A           U    A-     UGGUUUC 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Mun-Mir-1-P4_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACAUACUUCUUUAUAUGCCCAUA -23
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Mature sequence

Mun-Mir-1-P4_3p
mirBase accessionNone
Sequence 
41- UGGAAUGUUAAGAAGUAUGUAU -63
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