| MirGeneDB ID | Neu-Mir-1397 |
|---|---|
| Family name | MIR-1397 (all species) |
| Seed | GCAUUGC |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aca-Mir-1397 Ami-Mir-1397 Cpi-Mir-1397 Gga-Mir-1397 Gja-Mir-1397 Oan-Mir-1397 Pbv-Mir-1397 Sha-Mir-1397 Spt-Mir-1397 Tgu-Mir-1397 |
| Node of Origin (locus) | Amniota |
| Node of Origin (family) | Amniota |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051817.1: 388872773-388872830 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UAAGUCACCGACACAUUGCGGUGUGUGCAUUGCAUUGCGACGGGUUACAUCACUGAAUUUAGCAUGAUGUAACCCAACGCAGCAUGAUGUAAGCAUUGUCAUACGUUGGAGGCUUAAAGet precursor sequence |
| Structure | 10 20 30 40 50 UAAGUCACCGACACAUU--| G CA AC CUGAA GCGGUGU UGCAUUG UUGCG GGGUUACAUCA U UGUUACG AUGUAGU GACGC CCCAAUGUAGU U AAAUUCGGAGGUUGCAUAC^ A AC AA ACGAU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14) |
| Mature sequence | Neu-Mir-1397_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UGCAUUGCGACGGGUUACAUCA -22
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|
| Star sequence | Neu-Mir-1397_3p* (predicted) |
| mirBase accession | None |
| Sequence |
36- AUGUAACCCAACGCAGCAUGAU -58
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|
