| MirGeneDB ID | Pbv-Mir-1397 |
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| Family name |
MIR-1397 (all species) |
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| Seed |
GCAUUGC |
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| Species |
Burmese python (Python bivittatus) |
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| MiRBase ID |
pbv-mir-1397
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| Paralogues |
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| Orthologues |
Aca-Mir-1397
Ami-Mir-1397
Cpi-Mir-1397
Gga-Mir-1397
Gja-Mir-1397
Neu-Mir-1397
Oan-Mir-1397
Sha-Mir-1397
Spt-Mir-1397
Tgu-Mir-1397
|
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| Node of Origin (locus) |
Amniota
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| Node of Origin (family) |
Amniota
|
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Genome context
(GCA_000186305.2_Python_molurus_bivittatus) |
KE957594.1: 57716-57773 [-]
|
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Precursor
(pre-Mir +30nt flank) |
UAACUUACUGACAAAGUGCGAUGUGUGCAUUGCAUUGCGACGGGUUACAUCACUGGUCAUAACAUGAUGUAACCCAACGCAGCAUGAUGUAAGCAUCGUGAUACAUUGGAGGUUUAAA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UAACUUACUGACAAAGU--| G CA AC CUGGU
GCGAUGU UGCAUUG UUGCG GGGUUACAUCA C
UGCUACG AUGUAGU GACGC CCCAAUGUAGU A
AAAUUUGGAGGUUACAUAG^ A AC AA ACAAU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | UG at 5p(-14) |
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Tissue expression
|
|
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| Mature sequence |
Pbv-Mir-1397_5p |
| mirBase accession | MIMAT0039079 |
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| Sequence |
0- UGCAUUGCGACGGGUUACAUCA -22
Get sequence
|
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| Star sequence |
Pbv-Mir-1397_3p* |
| mirBase accession | MIMAT0039080 |
|---|
| Sequence |
36- AUGUAACCCAACGCAGCAUGAU -58
Get sequence
|
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