MirGeneDB ID | Neu-Mir-460-P1 |
---|---|
Family name | MIR-460 (all species) |
Seed | CUGCAUU |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | |
Orthologues | Aca-Mir-460-P1 Ami-Mir-460-P1 Cli-Mir-460-P1 Cpi-Mir-460-P1 Dre-Mir-460-P1 Gga-Mir-460-P1 Gja-Mir-460-P1 Gmo-Mir-460-P1 Lch-Mir-460-P1 Loc-Mir-460-P1 Mal-Mir-460-P1 Mdo-Mir-460-P1 Mun-Mir-460-P1 Oan-Mir-460-P1 Sha-Mir-460-P1 Spt-Mir-460-P1 Tgu-Mir-460-P1 Tni-Mir-460-P1 Xla-Mir-460-P1a Xla-Mir-460-P1b Xtr-Mir-460-P1 |
Node of Origin (locus) | Osteichthyes |
Node of Origin (family) | Osteichthyes |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051813.1: 11472193-11472250 [+] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | CUGAGGGGGGACACACCUGACUUUAUAGAACCUGCAUUGUACACACUGUGUGUUUUCACUACUAUGCACAGCGCAUACAAUGUGGAUACUAUAAGAGUCACUGACAGCAUCGGUGCCCGet precursor sequence |
Structure | 10 20 30 40 50 CUGAGGGGGGACACACC- -| AAC UG CACA GUUUUC UGACUU UAUAG C CAUUGUA CUGUGU A ACUGAG AUAUC G GUAACAU GACACG C CCCGUGGCUACGACAGUC A^ AUA GU ACGC UAUCAU 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | No |
Motifs | CNNC at 3p(+17) |
Mature sequence | Neu-Mir-460-P1_5p |
mirBase accession | None |
Sequence |
0- CCUGCAUUGUACACACUGUGUG -22
Get sequence
|
Star sequence | Neu-Mir-460-P1_3p* |
mirBase accession | None |
Sequence |
36- CACAGCGCAUACAAUGUGGAUA -58
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