MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-460-P1

Family name MIR-460 (all species)
Seed CUGCAUU
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-460-P2 
Orthologues Aca-Mir-460-P1  Ami-Mir-460-P1  Cli-Mir-460-P1  Cpi-Mir-460-P1  Dre-Mir-460-P1  Gga-Mir-460-P1  Gmo-Mir-460-P1  Lch-Mir-460-P1  Loc-Mir-460-P1  Mal-Mir-460-P1  Mdo-Mir-460-P1  Mun-Mir-460-P1  Neu-Mir-460-P1  Oan-Mir-460-P1  Sha-Mir-460-P1  Spt-Mir-460-P1  Tgu-Mir-460-P1  Tni-Mir-460-P1  Xla-Mir-460-P1a  Xla-Mir-460-P1b  Xtr-Mir-460-P1 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015160073.1: 152-210 [-]
Precursor
(pre-Mir +30nt flank)
UUGCAGCUGAGAUGACCUGGCCUUAUAGGACCUGCAUUGUACACACUGUGUGUAAGAAUUGGAGAUGCACAGCGCAUACAAUGUGGAUACUAUAAAAGUCAAUGUCGGCGUGGCCACCC
Get precursor sequence
Structure
        10         20         30        40        50         
UUGCAGCUGAGAUGACC-    C-|     GAC UG       CACA      GUAAGAA 
                  UGGC  UUAUAG   C  CAUUGUA    CUGUGU       \
                  ACUG  AAUAUC   G  GUAACAU    GACACG       U
CCCACCGGUGCGGCUGUA    AA^     AUA GU       ACGC      UAGAGGU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Gja-Mir-460-P1_5p
mirBase accessionNone
Sequence 
0- CCUGCAUUGUACACACUGUGUG -22
Get sequence
Star sequence

Gja-Mir-460-P1_3p*
mirBase accessionNone
Sequence 
37- CACAGCGCAUACAAUGUGGAUA -59
Get sequence