MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-460-P1

Family name MIR-460 (all species)
Seed CUGCAUU
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues
Orthologues Aca-Mir-460-P1  Ami-Mir-460-P1  Cli-Mir-460-P1  Cpi-Mir-460-P1  Dre-Mir-460-P1  Gga-Mir-460-P1  Gja-Mir-460-P1  Gmo-Mir-460-P1  Lch-Mir-460-P1  Loc-Mir-460-P1  Mal-Mir-460-P1  Mdo-Mir-460-P1  Mun-Mir-460-P1  Neu-Mir-460-P1  Oan-Mir-460-P1  Spt-Mir-460-P1  Tgu-Mir-460-P1  Tni-Mir-460-P1  Xla-Mir-460-P1a  Xla-Mir-460-P1b  Xtr-Mir-460-P1 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(DEVIL_add)		 GL841580.1: 38710-38767 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGAGGGGGGACACACCUGACUUUAUAGAACCUGCAUUGUACACACUGUGUGUUUUCACUACUAUGCACAGCGCAUACAAUGUGGAUACUAUAAGAGUCACUGACGGCAUCGGUGCCC
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Structure
        10         20         30        40        50        
CUGAGGGGGGACACACC-      -|    AAC UG       CACA      GUUUUC 
                  UGACUU UAUAG   C  CAUUGUA    CUGUGU      A
                  ACUGAG AUAUC   G  GUAACAU    GACACG      C
CCCGUGGCUACGGCAGUC      A^    AUA GU       ACGC      UAUCAU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-460-P1_5p
mirBase accessionNone
Sequence 
0- CCUGCAUUGUACACACUGUGUG -22
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Co-mature sequence

Sha-Mir-460-P1_3p
mirBase accessionNone
Sequence 
36- CACAGCGCAUACAAUGUGGAUA -58
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