MirGeneDB 3.0
MirGeneDB ID

Loc-Mir-460-P1

Family name MIR-460 (all species)
Seed CUGCAUU
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues Loc-Mir-460-P2 
Orthologues Aca-Mir-460-P1  Ami-Mir-460-P1  Cli-Mir-460-P1  Cpi-Mir-460-P1  Dre-Mir-460-P1  Gga-Mir-460-P1  Gja-Mir-460-P1  Gmo-Mir-460-P1  Lch-Mir-460-P1  Mal-Mir-460-P1  Mdo-Mir-460-P1  Mun-Mir-460-P1  Neu-Mir-460-P1  Oan-Mir-460-P1  Sha-Mir-460-P1  Spt-Mir-460-P1  Tgu-Mir-460-P1  Tni-Mir-460-P1  Xla-Mir-460-P1a  Xla-Mir-460-P1b  Xtr-Mir-460-P1 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(LepOcu1)		 LG9: 23488493-23488550 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAUCUCCUUUGAAGUUAGGCUUUACAGCUCCUGCAUUGUACACACUGUGUGUAUCAUUUCUAUAUGCACAGCGCAUACAAUGUGGAUGUUGUAUUGCCCACUAACUGCAUCACCUUU
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Structure
        10         20         30        40        50         
AAAUCUCCUUUGAAGUUA-   UU      -|  U        CACA      GUAUCAU 
                   GGC  UACAGC UCC GCAUUGUA    CUGUGU       \
                   CCG  AUGUUG AGG UGUAACAU    GACACG       U
UUUCCACUACGUCAAUCAC   UU      U^  -        ACGC      UAUAUCU 
      110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Mature sequence

Loc-Mir-460-P1_5p
mirBase accessionNone
Sequence 
0- CCUGCAUUGUACACACUGUGUG -22
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Star sequence

Loc-Mir-460-P1_3p*
mirBase accessionNone
Sequence 
37- CACAGCGCAUACAAUGUGGAU -58
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