MirGeneDB 3.0
MirGeneDB ID

Obi-Mir-36-P14

Family name MIR-36 (all species)
Seed CACCGGG
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues Obi-Mir-36-P15 
Orthologues Agr-Mir-36  Bge-Mir-36  Cbr-Mir-36-o14  Cte-Mir-36  Dgr-Mir-36  Dlo-Mir-36  Dma-Mir-36  Dpu-Mir-36  Eba-Mir-36  Esc-Mir-36-P14  Gsp-Mir-36  Isc-Mir-36  Lhy-Mir-36  Llo-Mir-36  Mgi-Mir-36  Mom-Mir-36  Npo-Mir-36  Ofu-Mir-36  Ovu-Mir-36-P14  Pau-Mir-36  Pcr-Mir-36  Pdu-Mir-36  Pve-Mir-36  Rph-Mir-36  Snu-Mir-36  Tca-Mir-36  War-Mir-36 
Node of Origin (locus) Coleoidea
Node of Origin (family) Protostomia
Genome context
(PRJNA270931_OBI)		 KQ419452: 306348-306412 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAGCAGUAAUUUUUCUUGGUUGUUUUGAGUGGAUGAUGUUUGCCCGGGAGGUGUGUGCAAUUAACUUUAUCAUCACCGGGUGAACAUUCAUUCGCUUAACUCCAACCAAUCGCAACGCUGACGAU
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Structure
        10         20         30         40        50        60  
AAGCAGUAAUUUUUCUU-     UU-           -|    UG     GA    UGUGCAAU 
                  GGUUG   UUGAGUGGAUG AUGUU  CCCGG  GGUG        \
                  CCAAC   AAUUCGCUUAC UACAA  GGGCC  CUAC        U
UAGCAGUCGCAACGCUAA     CUC           U^    GU     A-    UAUUUCAA 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Star sequence

Obi-Mir-36-P14_5p*
mirBase accessionNone
Sequence 
0- GGAUGAUGUUUGCCCGGGAGGUG -23
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Mature sequence

Obi-Mir-36-P14_3p
mirBase accessionNone
Sequence 
42- UCACCGGGUGAACAUUCAUUCGC -65
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