MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-155

Family name MIR-155 (all species)
Seed UAAUGCU
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-155
Paralogues
Orthologues Aca-Mir-155  Ami-Mir-155  Bta-Mir-155  Cfa-Mir-155  Cja-Mir-155  Cli-Mir-155  Cmi-Mir-155  Cpi-Mir-155  Cpo-Mir-155  Dno-Mir-155  Dre-Mir-155  Ebu-Mir-155  Eca-Mir-155  Ete-Mir-155  Gga-Mir-155  Gja-Mir-155  Gmo-Mir-155  Hsa-Mir-155  Laf-Mir-155  Lch-Mir-155  Loc-Mir-155  Mal-Mir-155  Mdo-Mir-155  Mml-Mir-155  Mmr-Mir-155  Mmu-Mir-155  Mun-Mir-155  Neu-Mir-155  Oan-Mir-155  Ocu-Mir-155  Pab-Mir-155  Pbv-Mir-155  Rno-Mir-155  Sha-Mir-155  Spt-Mir-155-P3  Spt-Mir-155-P4  Sto-Mir-155  Tgu-Mir-155  Tni-Mir-155  Xla-Mir-155-P1  Xla-Mir-155-P2  Xtr-Mir-155 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046100.1: 1740988-1741050 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAGGCGAGGACGAGCCGCCUGUGUCGAGGUUAAUGCUAUCGUUGAUGGGGUUCCGUGCAUUGCUCAGUGGCCCUGCCAACGUAGCAUUGUCCACGCCACAGCAGCCCAAGCAACGAGUCUCU
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Structure
        10           20        30        40        50        60 
CCAGGCGAGGACGAGCC---| C    U  A  U        U     AU      CCGUGCA 
                    GC UGUG CG GG UAAUGCUA CGUUG  GGGGUU       U
                    CG ACAC GC CC GUUACGAU GCAAC  UCCCGG       U
UCUCUGAGCAACGAACCCGA^ -    C  A  U        -     CG      UGACUCG 
 120       110        100        90         80        70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Br Gi Gu He Ki La Li Mo Mu Sk
Mature sequence

Pma-Mir-155_5p
mirBase accessionMIMAT0019485
Sequence 
0- UUAAUGCUAUCGUUGAUGGGGUU -23
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Star sequence

Pma-Mir-155_3p* (predicted)
mirBase accessionNone
Sequence 
41- CCCUGCCAACGUAGCAUUGUCC -63
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