MirGeneDB 3.0
MirGeneDB ID

Ami-Mir-155

Family name MIR-155 (all species)
Seed UAAUGCU
Species American alligator (Alligator mississippiensis)
MiRBase ID ami-mir-155
Paralogues
Orthologues Aca-Mir-155  Bta-Mir-155  Cfa-Mir-155  Cja-Mir-155  Cli-Mir-155  Cmi-Mir-155  Cpi-Mir-155  Cpo-Mir-155  Dno-Mir-155  Dre-Mir-155  Ebu-Mir-155  Eca-Mir-155  Ete-Mir-155  Gga-Mir-155  Gja-Mir-155  Gmo-Mir-155  Hsa-Mir-155  Laf-Mir-155  Lch-Mir-155  Loc-Mir-155  Mal-Mir-155  Mdo-Mir-155  Mml-Mir-155  Mmr-Mir-155  Mmu-Mir-155  Mun-Mir-155  Neu-Mir-155  Oan-Mir-155  Ocu-Mir-155  Pab-Mir-155  Pbv-Mir-155  Pma-Mir-155  Rno-Mir-155  Sha-Mir-155  Spt-Mir-155-P3  Spt-Mir-155-P4  Sto-Mir-155  Tgu-Mir-155  Tni-Mir-155  Xla-Mir-155-P1  Xla-Mir-155-P2  Xtr-Mir-155 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_000281125.3_ASM28112v4_AMI_add)		 NW_017713645.1: 43681804-43681863 [+] UCSC
Precursor
(pre-Mir +30nt flank)
UACUGGAGCUCUUCUGUAGGCUGUAUGUUGUUAAUGCUAAUCGUGAUAGGGGUUUUACCUCUGACUGACUCCUACAUGUUAGCAUUAGCACUGUAUGAUGCCUGUUACCAGAAUUCACAU
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Structure
        10        20          30        40        50        60
UACUGGAGCUCUUCUGUA   U--|   GU            U    A        UUACC 
                  GGC   GUAU  UGUUAAUGCUAA CGUG UAGGGGUU     U
                  CCG   UAUG  ACGAUUACGAUU GUAC AUCCUCAG     C
UACACUUAAGACCAUUGU   UAG^   UC            -    -        UCAGU 
.       110       100        90        80          70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Ami-Mir-155_5p
mirBase accessionMIMAT0038185
Sequence 
0- UUAAUGCUAAUCGUGAUAGGGGUU -24
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Star sequence

Ami-Mir-155_3p* (predicted)
mirBase accessionNone
Sequence 
38- CUCCUACAUGUUAGCAUUAGCA -60
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