MirGeneDB 2.1
MirGeneDB ID

Xtr-Mir-155

Family name MIR-155 (all species)
Seed UAAUGCU
Species Tropical clawed frog (Xenopus tropicalis)
MiRBase ID xtr-mir-155
Paralogues
Orthologues Aca-Mir-155  Ami-Mir-155  Bta-Mir-155  Cfa-Mir-155  Cli-Mir-155  Cmi-Mir-155  Cpi-Mir-155  Cpo-Mir-155  Dno-Mir-155  Dre-Mir-155  Ebu-Mir-155  Ete-Mir-155  Gga-Mir-155  Gja-Mir-155  Gmo-Mir-155  Hsa-Mir-155  Lch-Mir-155  Loc-Mir-155  Mal-Mir-155  Mdo-Mir-155  Mml-Mir-155  Mmu-Mir-155  Mun-Mir-155  Oan-Mir-155  Ocu-Mir-155  Pbv-Mir-155  Pma-Mir-155  Rno-Mir-155  Sha-Mir-155  Spt-Mir-155-P3  Spt-Mir-155-P4  Sto-Mir-155  Tgu-Mir-155  Tni-Mir-155  Xla-Mir-155-P1  Xla-Mir-155-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(xenTro9_add)		 chr2: 14606423-14606484 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACCUGGAUUCAAACCUGAGCUGCACAGUAUUAAUGCUAAUCGUGAUAGGGGUUUUUUAAUACAUAUUGACUCCUACAUGUUAGCAUUAUUAUCAUGUGGUUUCACUUUCCAAGGAAAACCA
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Structure
        10          20        30        40        50        60 
GACCUGGAUUCAAACCU--|   UG  CA   U         U    A        UUUUAA 
                   GAGC  CA  GUA UAAUGCUAA CGUG UAGGGGUU      U
                   UUUG  GU  UAU AUUACGAUU GUAC AUCCUCAG      A
ACCAAAAGGAACCUUUCAC^   GU  AC   U         -    -        UUAUAC 
120       110       100        90         80         70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
-   +
Br Em Em Em Em He
Mature sequence

Xtr-Mir-155_5p
mirBase accessionMIMAT0003608
Sequence 
0- UUAAUGCUAAUCGUGAUAGGGGUU -24
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Proposed targets TargetScanVert: xtr-miR-155
Star sequence

Xtr-Mir-155_3p* (predicted)
mirBase accessionNone
Sequence 
40- CUCCUACAUGUUAGCAUUAUUA -62
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