MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-155

Family name MIR-155 (all species)
Seed UAAUGCU
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-155  Ami-Mir-155  Bta-Mir-155  Cfa-Mir-155  Cja-Mir-155  Cli-Mir-155  Cmi-Mir-155  Cpi-Mir-155  Cpo-Mir-155  Dno-Mir-155  Dre-Mir-155  Ebu-Mir-155  Eca-Mir-155  Ete-Mir-155  Gga-Mir-155  Gmo-Mir-155  Hsa-Mir-155  Laf-Mir-155  Lch-Mir-155  Loc-Mir-155  Mal-Mir-155  Mdo-Mir-155  Mml-Mir-155  Mmr-Mir-155  Mmu-Mir-155  Mun-Mir-155  Neu-Mir-155  Oan-Mir-155  Ocu-Mir-155  Pab-Mir-155  Pbv-Mir-155  Pma-Mir-155  Rno-Mir-155  Sha-Mir-155  Spt-Mir-155-P3  Spt-Mir-155-P4  Sto-Mir-155  Tgu-Mir-155  Tni-Mir-155  Xla-Mir-155-P1  Xla-Mir-155-P2  Xtr-Mir-155 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015241179.1: 451-511 [-]
Precursor
(pre-Mir +30nt flank)
UUUAGGAUUUCAUCUGCAGGCCAUAUGUAGUUAAUGCUAAUCGUGAUAGGGGUUUUAUCUUUUGACUGACUCCUACAUAUUAGCAUUAACAGUGUAUGAUGCCUAUUCUCAGUUGAGAUUC
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Structure
        10        20          30        40        50        60 
UUUAGGAUUUCAUCUGCA   --|   UG A            C   A        UUAUCU 
                  GGC  CAUA  U GUUAAUGCUAAU GUG UAGGGGUU      \
                  CCG  GUAU  G CAAUUACGAUUA UAC AUCCUCAG      U
CUUAGAGUUGACUCUUAU   UA^   GU A            -   -        UCAGUU 
 .       110       100        90        80          70
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Gja-Mir-155_5p (predicted)
mirBase accessionNone
Sequence 
0- UUAAUGCUAAUCGUGAUAGGGGUU -24
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Star sequence

Gja-Mir-155_3p* (predicted)
mirBase accessionNone
Sequence 
39- CUCCUACAUAUUAGCAUUAACA -61
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