MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-155

Family name MIR-155 (all species)
Seed UAAUGCU
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues
Orthologues Aca-Mir-155  Ami-Mir-155  Bta-Mir-155  Cfa-Mir-155  Cja-Mir-155  Cli-Mir-155  Cmi-Mir-155  Cpi-Mir-155  Cpo-Mir-155  Dno-Mir-155  Dre-Mir-155  Eca-Mir-155  Ete-Mir-155  Gga-Mir-155  Gja-Mir-155  Gmo-Mir-155  Hsa-Mir-155  Laf-Mir-155  Lch-Mir-155  Loc-Mir-155  Mal-Mir-155  Mdo-Mir-155  Mml-Mir-155  Mmr-Mir-155  Mmu-Mir-155  Mun-Mir-155  Neu-Mir-155  Oan-Mir-155  Ocu-Mir-155  Pab-Mir-155  Pbv-Mir-155  Pma-Mir-155  Rno-Mir-155  Sha-Mir-155  Spt-Mir-155-P3  Spt-Mir-155-P4  Sto-Mir-155  Tgu-Mir-155  Tni-Mir-155  Xla-Mir-155-P1  Xla-Mir-155-P2  Xtr-Mir-155 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02009374.1: 805960-806019 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGACUGCAGCUACAUGUUGCCUGUUUGGGGAUAAUGCUAUUGUUGAUGGGGUCGAAAAUUUGUUGCGGCCCUUUCAAUGUAGCAUUUUCUUUAACAGGUAAAACAGCAGCAAUGGAAGUA
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Structure
        10           20        30        40        50          
UGACUGCAGCUACAUGU---|       U     U        U     U      GAAAAU 
                    UGCCUGUU GGGGA AAUGCUAU GUUGA GGGGUC      \
                    AUGGACAA UUUCU UUACGAUG UAACU UCCCGG      U
AUGAAGGUAACGACGACAAA^       -     U        -     U      CGUUGU 
.       110       100         90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ebu-Mir-155_5p
mirBase accessionNone
Sequence 
0- AUAAUGCUAUUGUUGAUGGGGUC -23
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Star sequence

Ebu-Mir-155_3p* (predicted)
mirBase accessionNone
Sequence 
38- CCCUUUCAAUGUAGCAUUUUCU -60
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