MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-155

Family name MIR-155 (all species)
Seed UAAUGCU
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-155  Ami-Mir-155  Bta-Mir-155  Cfa-Mir-155  Cli-Mir-155  Cmi-Mir-155  Cpi-Mir-155  Cpo-Mir-155  Dno-Mir-155  Dre-Mir-155  Ebu-Mir-155  Eca-Mir-155  Ete-Mir-155  Gga-Mir-155  Gja-Mir-155  Gmo-Mir-155  Hsa-Mir-155  Laf-Mir-155  Lch-Mir-155  Loc-Mir-155  Mal-Mir-155  Mdo-Mir-155  Mml-Mir-155  Mmr-Mir-155  Mmu-Mir-155  Mun-Mir-155  Neu-Mir-155  Oan-Mir-155  Ocu-Mir-155  Pab-Mir-155  Pbv-Mir-155  Pma-Mir-155  Rno-Mir-155  Sha-Mir-155  Spt-Mir-155-P3  Spt-Mir-155-P4  Sto-Mir-155  Tgu-Mir-155  Tni-Mir-155  Xla-Mir-155-P1  Xla-Mir-155-P2  Xtr-Mir-155 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021935.1: 30002322-30002382 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUCCUCUGAGUUCUGAAGGCUGUAUGCUGUUAAUGCUAAUCGUGAUAGGGGUUUUUACCUCCAACUGACUCCUACAUGUUAGCAUUAACAGGGUAUGAUGCCUGUUACUAGCAUUCACAU
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Structure
        10        20          30        40        50        60 
CAUCCUCUGAGUUCUGAA   U--|   G             U    A        UUUACC 
                  GGC   GUAU CUGUUAAUGCUAA CGUG UAGGGGUU      \
                  CCG   UAUG GACAAUUACGAUU GUAC AUCCUCAG      U
UACACUUACGAUCAUUGU   UAG^   G             -    -        UCAACC 
 .       110       100        90        80          70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Cja-Mir-155_5p
mirBase accessionNone
Sequence 
0- UUAAUGCUAAUCGUGAUAGGGGUU -24
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Star sequence

Cja-Mir-155_3p* (predicted)
mirBase accessionNone
Sequence 
39- CUCCUACAUGUUAGCAUUAACA -61
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