Mir-155

MirGeneDB ID

Gga-Mir-155

Family name

MIR-155 (all species)

Seed

UAAUGCU

Species

Chicken (Gallus gallus)

MiRBase ID

gga-mir-155

Paralogues

Orthologues

Aca-Mir-155 Ami-Mir-155 Bta-Mir-155 Cfa-Mir-155 Cja-Mir-155 Cli-Mir-155 Cmi-Mir-155 Cpi-Mir-155 Cpo-Mir-155 Dno-Mir-155 Dre-Mir-155 Ebu-Mir-155 Eca-Mir-155 Ete-Mir-155 Gja-Mir-155 Gmo-Mir-155 Hsa-Mir-155 Laf-Mir-155 Lch-Mir-155 Loc-Mir-155 Mal-Mir-155 Mdo-Mir-155 Mml-Mir-155 Mmr-Mir-155 Mmu-Mir-155 Mun-Mir-155 Neu-Mir-155 Oan-Mir-155 Ocu-Mir-155 Pab-Mir-155 Pbv-Mir-155 Pma-Mir-155 Rno-Mir-155 Sha-Mir-155 Spt-Mir-155-P3 Spt-Mir-155-P4 Sto-Mir-155 Tgu-Mir-155 Tni-Mir-155 Xla-Mir-155-P1 Xla-Mir-155-P2 Xtr-Mir-155

Node of Origin (locus)

Vertebrata

Node of Origin (family)

Vertebrata

Genome context
(Gallus_gallus.GRCg6a)

1: 103797405-103797465 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CUCUAGAGUUCUUCUGUAGGCUGUAUGUUGUUAAUGCUAAUCGUGAUAGGGGUUUUUACCUCUGAAUGACUCCUACAUGUUAGCAUUAACACUGUACCAUGCCUCUCAUCAGAACUCACAA

Get precursor sequence

Structure

        10        20          30        40        50        60 
CUCUAGAGUUCUUCUGUA   U--|   GU            U    A        UUUACC 
                  GGC   GUAU  UGUUAAUGCUAA CGUG UAGGGGUU      \
                  CCG   CAUG  ACAAUUACGAUU GUAC AUCCUCAG      U
AACACUCAAGACUACUCU   UAC^   UC            -    -        UAAGUC 
 .       110       100        90        80          70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Ad	Ad	Ad	Br	Br	Ce	Ce	Ce	Ce	Gg	He	He	Hy	Hy	Ki	Ki	Li	Li	Lu	Lu	Ov	Pr	Pr	Sc	Sc	Sp	Sp	Te

Mature sequence

Gga-Mir-155_5p

mirBase accession

MIMAT0001106

Sequence

0- UUAAUGCUAAUCGUGAUAGGGGUU -24

Get sequence

Proposed targets

TargetScanVert: gga-miR-155
miRDB: MIMAT0001106

Star sequence

Gga-Mir-155_3p*

mirBase accession

None

Sequence

39- CUCCUACAUGUUAGCAUUAACA -61

Get sequence