MirGeneDB ID | Mun-Mir-155 |
Family name |
MIR-155 (all species) |
Seed |
UAAUGCU |
Species |
Microcaecilia (Microcaecilia unicolor) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Aca-Mir-155
Ami-Mir-155
Bta-Mir-155
Cfa-Mir-155
Cja-Mir-155
Cli-Mir-155
Cmi-Mir-155
Cpi-Mir-155
Cpo-Mir-155
Dno-Mir-155
Dre-Mir-155
Ebu-Mir-155
Eca-Mir-155
Ete-Mir-155
Gga-Mir-155
Gja-Mir-155
Gmo-Mir-155
Hsa-Mir-155
Laf-Mir-155
Lch-Mir-155
Loc-Mir-155
Mal-Mir-155
Mdo-Mir-155
Mml-Mir-155
Mmr-Mir-155
Mmu-Mir-155
Neu-Mir-155
Oan-Mir-155
Ocu-Mir-155
Pab-Mir-155
Pbv-Mir-155
Pma-Mir-155
Rno-Mir-155
Sha-Mir-155
Spt-Mir-155-P3
Spt-Mir-155-P4
Sto-Mir-155
Tgu-Mir-155
Tni-Mir-155
Xla-Mir-155-P1
Xla-Mir-155-P2
Xtr-Mir-155
|
Node of Origin (locus) |
Vertebrata
|
Node of Origin (family) |
Vertebrata
|
Genome context (Mun_miRNA_loci) |
155_LR594636.1:291932014-291932273: 101-160 [+]
|
Precursor (pre-Mir +30nt flank) |
GCCUGGAUGUUGUCGAUGGGCCAUAUGAGGUUAAUGCUAAUCGUGAUAGGGGUUUUAAAUGUGAAGAACUCCUACAUCUUAGCAUUAACAUUGUAUGAUGCCGAUUACACAUGGAACAAA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GCCUGGAUGUUGUCGAUG --| UG G UC A UUAAA
GGC CAUA A GUUAAUGCUAA GUG UAGGGGUU U
CCG GUAU U CAAUUACGAUU UAC AUCCUCAA G
AAACAAGGUACACAUUAG UA^ GU A C- - GAAGU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | UG at 5p(-14) |
Tissue expression
|
|
Mature sequence |
Mun-Mir-155_5p |
mirBase accession | None |
Sequence |
0- UUAAUGCUAAUCGUGAUAGGGGUU -24
Get sequence
|
Star sequence |
Mun-Mir-155_3p* |
mirBase accession | None |
Sequence |
38- CUCCUACAUCUUAGCAUUAACA -60
Get sequence
|