MirGeneDB 3.0
MirGeneDB ID

Tur-Mir-10-P1y

Family name MIR-10 (all species)
Seed CUCUGUA
Species Two-spotted spider mite (Tetranychus urticae)
MiRBase ID
Paralogues Tur-Mir-10-P1z-v1  Tur-Mir-10-P1z-v2  Tur-Mir-10-P2  Tur-Mir-10-P4u  Tur-Mir-10-P4v  Tur-Mir-10-P4w 
Orthologues Aae-Mir-10-P1-v1  Aae-Mir-10-P1-v2  Adi-Mir-10  Aga-Mir-10-P1-v1  Aga-Mir-10-P1-v2  Agr-Mir-10-P1  Asp-Mir-10  Asu-Mir-10-P1  Bfl-Mir-10-P1-v1  Bfl-Mir-10-P1-v2  Bge-Mir-10-P1-v1  Bge-Mir-10-P1-v2  Bla-Mir-10-P1-v1  Bla-Mir-10-P1-v2  Cbr-Mir-10-P1  Cel-Mir-10-P1  Cte-Mir-10-P1  Dan-Mir-10-P1  Dgr-Mir-10-P1  Dlo-Mir-10-P1-v1  Dlo-Mir-10-P1-v2  Dma-Mir-10-P1-v1  Dma-Mir-10-P1-v2  Dme-Mir-10-P1  Dmo-Mir-10-P1  Dpu-Mir-10-P1-v1  Dpu-Mir-10-P1-v2  Dsi-Mir-10-P1  Dya-Mir-10-P1  Eba-Mir-10-P1  Efe-Mir-10-P1  Egr-Mir-10-P1  Gpa-Mir-10-P1  Gsp-Mir-10-P1  Hme-Mir-10-P1-v1  Hme-Mir-10-P1-v2  Hru-Mir-10-P1  Isc-Mir-10-P1-v1  Isc-Mir-10-P1-v2  Lgi-Mir-10-P1  Lhy-Mir-10-P1  Llo-Mir-10-P1  Mgi-Mir-10-P1  Mom-Mir-10-P1  Npo-Mir-10-P1  Nve-Mir-10  Ofu-Mir-10-P1  Pau-Mir-10-P1  Pca-Mir-10-P1  Pdu-Mir-10-P1  Pfl-Mir-10-P1  Pmi-Mir-10-P1  Pve-Mir-10-P1  Rph-Mir-10-P1  Sko-Mir-10-P1  Sma-Mir-10-P1  Snu-Mir-10-P1  Spu-Mir-10-P1  Tca-Mir-10-P1-v1  Tca-Mir-10-P1-v2  War-Mir-10-P1  Xbo-Mir-10-P1 
Node of Origin (locus) T. urticae
Node of Origin (family) Eumetazoa
Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces)		 HE587311.1: 780226-780287 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAGAUUGUGUUUCAUCUUUGCUCUACAUUAACUCUGUAGACCCGAAUUUGUCUGAAAAUUAAUUUGUUACCAAUUCGGCUCUACAGAGGUUUUUGUGGCUCAUAUUUUGCGUCAUUUUCAAU
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Structure
        10          20        30         40        50          
AAGAUUGUGUUUCAUCUU--  CU     UU  -|        C       U  CUGAAAAU 
                    UG  CUACA  AA CUCUGUAGA CCGAAUU GU        \
                    AC  GGUGU  UU GAGACAUCU GGCUUAA CA        U
UAACUUUUACUGCGUUUUAU  UC     UU  G^        C       C  UUGUUUAA 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
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Mature sequence

Tur-Mir-10-P1y_5p
mirBase accessionNone
Sequence 
0- ACUCUGUAGACCCGAAUUUGU -21
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Star sequence

Tur-Mir-10-P1y_3p*
mirBase accessionNone
Sequence 
40- CAAUUCGGCUCUACAGAGGUUU -62
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