MirGeneDB 3.0
MirGeneDB ID

Tur-Mir-36-P36

Family name MIR-36 (all species)
Seed CACCGGG
Species Two-spotted spider mite (Tetranychus urticae)
MiRBase ID
Paralogues Tur-Mir-36-P30  Tur-Mir-36-P31  Tur-Mir-36-P32  Tur-Mir-36-P33  Tur-Mir-36-P34  Tur-Mir-36-P35 
Orthologues Agr-Mir-36  Bge-Mir-36  Cte-Mir-36  Dgr-Mir-36  Dlo-Mir-36  Dma-Mir-36  Dpu-Mir-36  Eba-Mir-36  Egr-Mir-36-o36  Gsp-Mir-36  Isc-Mir-36  Lhy-Mir-36  Llo-Mir-36  Mgi-Mir-36  Mom-Mir-36  Npo-Mir-36  Ofu-Mir-36  Pau-Mir-36  Pcr-Mir-36  Pdu-Mir-36  Pve-Mir-36  Rph-Mir-36  Snu-Mir-36  Tca-Mir-36  War-Mir-36 
Node of Origin (locus) T. urticae
Node of Origin (family) Protostomia
Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces)		 HE587309.1: 1097086-1097144 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UCUGCAUCAUUCCUCAAUCAUCAAUCGAUCCGGUGGCUUCCUCCUCGGUGGAUGCUGACUUGAACCAUCACCGGGAUGAAGGCAUCUUAUUGCUUGACCUAUCUGCACCAUUCCCUAAU
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Structure
        10        20          30        40        50          
UCUGCAUCAUUCCUCAAUCA--|   U    CC    G    C   U     G   CUGAC 
                      UCAA CGAU  GGUG CUUC UCC CGGUG AUG     \
                      AGUU GUUA  CUAC GAAG AGG GCCAC UAC     U
UAAUCCCUUACCACGUCUAUCC^   C    UU    G    U   -     -   CAAGU 
       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
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Star sequence

Tur-Mir-36-P36_5p*
mirBase accessionNone
Sequence 
0- CGGUGGCUUCCUCCUCGGUGGAUG -24
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Mature sequence

Tur-Mir-36-P36_3p
mirBase accessionNone
Sequence 
37- UCACCGGGAUGAAGGCAUCUUA -59
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