MirGeneDB 3.0
128 microRNA genes with seed CCCUGUA
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Dan-Mir-10-P1 dan-mir-10 MIR-10 CCCUGUA MIMAT0008476 None scaffold_13340 5417376 5417438 + Bilateria Eumetazoa No 1
Dme-Mir-10-P1 dme-mir-10 MIR-10 CCCUGUA MIMAT0000115 MIMAT0012531 3R 6809512 6809574 - Bilateria Eumetazoa No 1
Dmo-Mir-10-P1 dmo-mir-10 MIR-10 CCCUGUA MIMAT0008693 None scaffold_6540 16502920 16502982 + Bilateria Eumetazoa No 1
Dsi-Mir-10-P1 dsi-mir-10 MIR-10 CCCUGUA MIMAT0008887 None 3R 2529742 2529804 - Bilateria Eumetazoa No 1
Dya-Mir-10-P1 dya-mir-10 MIR-10 CCCUGUA MIMAT0009082 None 3R 7778013 7778075 + Bilateria Eumetazoa No 1
Gpa-Mir-10-P1 None MIR-10 CCCUGUA None None JMRQ01006282 198124 198183 - Bilateria Eumetazoa No 1
Aae-Mir-10-P1-v1 aae-mir-10 MIR-10 CCCUGUA MIMAT0014277 None supercont1.440 813557 813619 + Bilateria Eumetazoa No
Aga-Mir-10-P1-v1 aga-mir-10 MIR-10 CCCUGUA MIMAT0001497 None NC_064601.1 57801554 57801615 - Bilateria Eumetazoa No
Bge-Mir-10-P1-v1 None MIR-10 CCCUGUA None None KZ614729.1 496542 496599 - Bilateria Eumetazoa No 1
Dlo-Mir-10-P1-v1 None MIR-10 CCCUGUA None None NC_087226.1 5567209 5567266 + Bilateria Eumetazoa No 1
Dma-Mir-10-P1-v1 None MIR-10 CCCUGUA None None NC_046178.1 8231923 8231981 + Bilateria Eumetazoa No 1
Dpu-Mir-10-P1-v1 dpu-mir-10 MIR-10 CCCUGUA MIMAT0012636 None DAPPUscaffold_7 304826 304884 - Bilateria Eumetazoa No 1
Hme-Mir-10-P1-v1 hme-mir-10 MIR-10 CCCUGUA MIMAT0024932 None HE667778 152725 152782 - Bilateria Eumetazoa No 1
Isc-Mir-10-P1-v1 isc-mir-10 MIR-10 CCCUGUA MIMAT0012682 None NW_024609835.1 47870436 47870493 + Bilateria Eumetazoa No 1
Tca-Mir-10-P1-v1 tca-mir-10 MIR-10 CCCUGUA MIMAT0008357 MIMAT0019101 LG2 8460384 8460441 + Bilateria Eumetazoa No 1
Aca-Mir-10-P1b-v2 aca-mir-10b MIR-10 CCCUGUA MIMAT0021719 MIMAT0021720 GL343356.1 481997 482056 - Gnathostomata Eumetazoa No
Ami-Mir-10-P1b-v2 ami-mir-10b MIR-10 CCCUGUA MIMAT0038032 MIMAT0038033 NW_017714267.1 6396789 6396848 - Gnathostomata Eumetazoa No
Bta-Mir-10-P1b-v2 bta-mir-10b MIR-10 CCCUGUA MIMAT0003839 None NC_037329.1 20762762 20762821 - Gnathostomata Eumetazoa No
Cfa-Mir-10-P1b-v2 cfa-mir-10b MIR-10 CCCUGUA MIMAT0009837 None chr36 19958931 19958990 + Gnathostomata Eumetazoa No
Cja-Mir-10-P1b-v2 None MIR-10 CCCUGUA None None CM021920.1 50045287 50045346 - Gnathostomata Eumetazoa Unknown
Cli-Mir-10-P1b-v2 cli-mir-10b MIR-10 CCCUGUA MIMAT0038406 MIMAT0038407 scaffold893 612556 612615 - Gnathostomata Eumetazoa No
Cmi-Mir-10-P1b-v2 None MIR-10 CCCUGUA None None KI635868.1 5155563 5155619 + Gnathostomata Eumetazoa No
Cpi-Mir-10-P1b-v2 cpi-mir-10b MIR-10 CCCUGUA MIMAT0037627 MIMAT0037628 JH584712 2217469 2217528 + Gnathostomata Eumetazoa No
Cpo-Mir-10-P1b-v2 cpo-mir-10b MIR-10 CCCUGUA MIMAT0046847 MIMAT0046848 scaffold_3 14161470 14161529 - Gnathostomata Eumetazoa No
Dno-Mir-10-P1b-v2 dno-mir-10b MIR-10 CCCUGUA MIMAT0047499 MIMAT0047500 JH575655 3701010 3701069 + Gnathostomata Eumetazoa No
Eca-Mir-10-P1b-v2 eca-mir-10b MIR-10 CCCUGUA MIMAT0013090 None CM009165.1 54645770 54645829 + Gnathostomata Eumetazoa No
Ete-Mir-10-P1b-v2 None MIR-10 CCCUGUA None None JH980302 1714259 1714318 + Gnathostomata Eumetazoa No
Gga-Mir-10-P1b-v2 gga-mir-10b MIR-10 CCCUGUA MIMAT0001148 MIMAT0026521 7 16278930 16278989 - Gnathostomata Eumetazoa No
Gja-Mir-10-P1b-v2 None MIR-10 CCCUGUA None None NW_015165302.1 170054 170113 - Gnathostomata Eumetazoa No
Hsa-Mir-10-P1b-v2 hsa-mir-10b MIR-10 CCCUGUA MIMAT0000254 MIMAT0004556 chr2 176150330 176150389 + Gnathostomata Eumetazoa No
Loc-Mir-10-P1b-v2 None MIR-10 CCCUGUA None None LG12 15544685 15544744 - Gnathostomata Eumetazoa No
Mdo-Mir-10-P1b-v2 mdo-mir-10b MIR-10 CCCUGUA MIMAT0004090 MIMAT0026649 4 187496051 187496110 + Gnathostomata Eumetazoa No
Mml-Mir-10-P1b-v2 mml-mir-10b MIR-10 CCCUGUA MIMAT0006162 MIMAT0026798 CM014347.1 63264778 63264837 + Gnathostomata Eumetazoa No
Mmr-Mir-10-P1b-v2 mmr-mir-10 MIR-10 CCCUGUA MIMAT0049206 None CM007668.1 56818713 56818772 - Gnathostomata Eumetazoa No
Mmu-Mir-10-P1b-v2 mmu-mir-10b MIR-10 CCCUGUA MIMAT0000208 MIMAT0004538 chr2 74726075 74726134 + Gnathostomata Eumetazoa No
Mun-Mir-10-P1b-v2 None MIR-10 CCCUGUA None None 10-P1b-v2_LR594638.1:221812833-221812974 42 101 - Gnathostomata Eumetazoa Unknown
Neu-Mir-10-P1b-v2 None MIR-10 CCCUGUA None None CM051817.1 238710336 238710395 + Gnathostomata Eumetazoa No
Oan-Mir-10-P1b-v2 oan-mir-10b MIR-10 CCCUGUA MIMAT0007218 MIMAT0007219 NC_041736.1 19531514 19531573 + Gnathostomata Eumetazoa No
Ocu-Mir-10-P1b-v2 ocu-mir-10b MIR-10 CCCUGUA MIMAT0048099 MIMAT0048100 chr7 115709576 115709635 + Gnathostomata Eumetazoa No
Pab-Mir-10-P1b-v2 None MIR-10 CCCUGUA None None CM054690.2 78776443 78776502 + Gnathostomata Eumetazoa No
Pbv-Mir-10-P1b-v2 pbv-mir-10b-1 MIR-10 CCCUGUA MIMAT0038826 MIMAT0038827 KE953519.1 219089 219148 + Gnathostomata Eumetazoa No
Rno-Mir-10-P1b-v2 rno-mir-10b MIR-10 CCCUGUA MIMAT0000783 MIMAT0017092 chr3 61648004 61648063 + Gnathostomata Eumetazoa No
Sha-Mir-10-P1b-v2 sha-mir-10b MIR-10 CCCUGUA MIMAT0022799 None GL849635.1 2022372 2022431 + Gnathostomata Eumetazoa No
Sto-Mir-10-P1b-v2 None MIR-10 CCCUGUA None None BFAA01001523.1 62107 62163 - Gnathostomata Eumetazoa No
Tgu-Mir-10-P1b-v2 tgu-mir-10a MIR-10 CCCUGUA MIMAT0018618 MIMAT0027035 7 16417454 16417513 + Gnathostomata Eumetazoa No
Xtr-Mir-10-P1b-v2 xtr-mir-10b MIR-10 CCCUGUA MIMAT0003558 None chr9 59969715 59969772 + Gnathostomata Eumetazoa No
Dre-Mir-10-P1b1-v2 dre-mir-10b-1 MIR-10 CCCUGUA MIMAT0001268 MIMAT0031919 chr9 1952964 1953023 - Clupeocephala Eumetazoa No
Gmo-Mir-10-P1b1-v2 gmo-mir-10a-1 MIR-10 CCCUGUA MIMAT0044088 MIMAT0044089 GeneScaffold_1009 374096 374156 - Clupeocephala Eumetazoa No 1
Mal-Mir-10-P1b1-v2 None MIR-10 CCCUGUA None None KV884718.1 892127 892186 + Clupeocephala Eumetazoa Unknown
Tni-Mir-10-P1b1-v2 tni-mir-10b-2 MIR-10 CCCUGUA MIMAT0002964 None 2 13424291 13424350 - Clupeocephala Eumetazoa Unknown
Dre-Mir-10-P1b2-v2 dre-mir-10d MIR-10 CCCUGUA MIMAT0001771 MIMAT0003394 chr6 10867052 10867111 + Clupeocephala Eumetazoa No
Gmo-Mir-10-P1b2-v2 gmo-mir-10b MIR-10 CCCUGUA MIMAT0044188 None GeneScaffold_2339 30813 30869 + Clupeocephala Eumetazoa Unknown 1
Xla-Mir-10-P1b3-v2 xla-mir-10b MIR-10 CCCUGUA MIMAT0046424 MIMAT0046425 NC_030740.1 67996929 67996988 - X. laevis Eumetazoa No
Xla-Mir-10-P1b4-v2 None MIR-10 CCCUGUA None None NC_030741.1 62207499 62207556 - X. laevis Eumetazoa No
Aca-Mir-10-P1c-v2 aca-mir-10a MIR-10 CCCUGUA MIMAT0021717 MIMAT0021718 6 75570728 75570787 - Gnathostomata Eumetazoa No 1
Ami-Mir-10-P1c-v2 ami-mir-10a MIR-10 CCCUGUA MIMAT0038030 MIMAT0038031 NW_017708231.1 3410198 3410257 - Gnathostomata Eumetazoa No 1
Bta-Mir-10-P1c-v2 bta-mir-10a MIR-10 CCCUGUA MIMAT0003786 None NC_037346.1 37912325 37912385 + Gnathostomata Eumetazoa No 1
Cfa-Mir-10-P1c-v2 cfa-mir-10a MIR-10 CCCUGUA MIMAT0006737 None chr9 24842172 24842232 - Gnathostomata Eumetazoa No 1
Cja-Mir-10-P1c-v2 None MIR-10 CCCUGUA None None CM021919.1 113782013 113782073 + Gnathostomata Eumetazoa Unknown 1
Cli-Mir-10-P1c-v2 cli-mir-10a MIR-10 CCCUGUA MIMAT0038404 MIMAT0038405 scaffold265 1564494 1564553 + Gnathostomata Eumetazoa No 1
Cmi-Mir-10-P1c-v2 None MIR-10 CCCUGUA None None KI635976.1 1292316 1292376 + Gnathostomata Eumetazoa No 1
Cpi-Mir-10-P1c-v2 cpi-mir-10a MIR-10 CCCUGUA MIMAT0037625 MIMAT0037626 JH584731 2427011 2427070 - Gnathostomata Eumetazoa Unknown 1
Cpo-Mir-10-P1c-v2 cpo-mir-10a MIR-10 CCCUGUA MIMAT0046845 MIMAT0046846 scaffold_53 8675060 8675120 + Gnathostomata Eumetazoa No 1
Dno-Mir-10-P1c-v2 dno-mir-10a MIR-10 CCCUGUA MIMAT0047497 MIMAT0047498 JH562571 188562 188622 - Gnathostomata Eumetazoa No 1
Eca-Mir-10-P1c-v2 eca-mir-10a MIR-10 CCCUGUA MIMAT0013019 None CM009158.1 24703549 24703609 - Gnathostomata Eumetazoa No 1
Ete-Mir-10-P1c-v2 None MIR-10 CCCUGUA None None JH980319 25189333 25189393 + Gnathostomata Eumetazoa Unknown 1
Gga-Mir-10-P1c-v2 gga-mir-10a MIR-10 CCCUGUA MIMAT0007731 MIMAT0007732 27 6242497 6242556 + Gnathostomata Eumetazoa No 1
Gja-Mir-10-P1c-v2 None MIR-10 CCCUGUA None None NW_015168072.1 295318 295377 + Gnathostomata Eumetazoa No 1
Hsa-Mir-10-P1c-v2 hsa-mir-10a MIR-10 CCCUGUA MIMAT0000253 MIMAT0004555 chr17 48579865 48579925 - Gnathostomata Eumetazoa No 1
Laf-Mir-10-P1c-v2 None MIR-10 CCCUGUA None None GL010058.1 19766951 19767011 + Gnathostomata Eumetazoa No 1
Loc-Mir-10-P1c-v2 None MIR-10 CCCUGUA None None LG15 9188974 9189034 - Gnathostomata Eumetazoa No 1
Mdo-Mir-10-P1c-v2 mdo-mir-10a MIR-10 CCCUGUA MIMAT0004089 MIMAT0026648 2 201156746 201156806 - Gnathostomata Eumetazoa No 1
Mml-Mir-10-P1c-v2 mml-mir-10a MIR-10 CCCUGUA MIMAT0006161 MIMAT0026797 CM014351.1 48215831 48215891 + Gnathostomata Eumetazoa No 1
Mmr-Mir-10-P1c-v2 mmr-mir-10a MIR-10 CCCUGUA MIMAT0049211 None CM007676.1 26418621 26418681 + Gnathostomata Eumetazoa No 1
Mmu-Mir-10-P1c-v2 mmu-mir-10a MIR-10 CCCUGUA MIMAT0000648 MIMAT0004659 chr11 96317187 96317247 + Gnathostomata Eumetazoa No 1
Mun-Mir-10-P1c-v2 None MIR-10 CCCUGUA None None 10-P1d-v1_LR594643.1:63956865-63957127 102 162 + Gnathostomata Eumetazoa No 1
Neu-Mir-10-P1c-v2 None MIR-10 CCCUGUA None None CM051814.1 352452188 352452250 + Gnathostomata Eumetazoa Unknown 1 1
Oan-Mir-10-P1c-v2 oan-mir-10a MIR-10 CCCUGUA MIMAT0007122 MIMAT0007123 NC_041738.1 58283265 58283325 - Gnathostomata Eumetazoa No 1
Ocu-Mir-10-P1c-v2 ocu-mir-10a MIR-10 CCCUGUA MIMAT0048097 MIMAT0048098 chr19 38782600 38782660 + Gnathostomata Eumetazoa No 1
Pab-Mir-10-P1c-v2 None MIR-10 CCCUGUA None None CM054698.2 67480366 67480426 + Gnathostomata Eumetazoa Unknown 1
Pbv-Mir-10-P1c-v2 pbv-mir-10a MIR-10 CCCUGUA MIMAT0038824 MIMAT0038825 KE955436.1 47290 47349 + Gnathostomata Eumetazoa No 1
Rno-Mir-10-P1c-v2 rno-mir-10a MIR-10 CCCUGUA MIMAT0000782 MIMAT0004709 chr10 84165972 84166032 + Gnathostomata Eumetazoa No 1
Sha-Mir-10-P1c-v2 None MIR-10 CCCUGUA None None GL856828.1 1035015 1035075 - Gnathostomata Eumetazoa No 1
Sto-Mir-10-P1c-v2 None MIR-10 CCCUGUA None None BFAA01000145.1 326956 327016 - Gnathostomata Eumetazoa No 1
Tgu-Mir-10-P1c-v2 tgu-mir-10a MIR-10 CCCUGUA MIMAT0018618 MIMAT0027035 gnl|ti|1257183866 638 698 + Gnathostomata Eumetazoa No
Xtr-Mir-10-P1c-v2 xtr-mir-10a MIR-10 CCCUGUA MIMAT0003557 None chr10 5060953 5061013 - Gnathostomata Eumetazoa No 1 1
Dre-Mir-10-P1c1-v2 dre-mir-10c MIR-10 CCCUGUA MIMAT0001770 MIMAT0031935 chr3 23720667 23720727 + Clupeocephala Eumetazoa No 1
Gmo-Mir-10-P1c1-v2 gmo-mir-10c MIR-10 CCCUGUA MIMAT0044225 MIMAT0044226 GeneScaffold_3558 107635 107698 + Clupeocephala Eumetazoa No 1
Mal-Mir-10-P1c1-v2 None MIR-10 CCCUGUA None None KV884780.1 273803 273866 + Clupeocephala Eumetazoa Unknown 1
Tni-Mir-10-P1c1-v2 tni-mir-10c MIR-10 CCCUGUA MIMAT0003088 None Un_random 5507316 5507379 - Clupeocephala Eumetazoa No 1
Dre-Mir-10-P1c2-v2 dre-mir-10a MIR-10 CCCUGUA MIMAT0001267 MIMAT0003391 chr12 27134887 27134943 + Clupeocephala Eumetazoa No 1
Gmo-Mir-10-P1c2-v2 gmo-mir-10d MIR-10 CCCUGUA MIMAT0044307 MIMAT0044308 GeneScaffold_565 163216 163273 - Clupeocephala Eumetazoa No 1 1
Tni-Mir-10-P1c2-v2 None MIR-10 CCCUGUA None None 2 1745677 1745737 - Clupeocephala Eumetazoa Unknown 1 1
Mal-Mir-10-P1c2a-v2 None MIR-10 CCCUGUA None None KV884755.1 566953 567013 - M. albus Eumetazoa Unknown 1 1
Mal-Mir-10-P1c2b-v2 None MIR-10 CCCUGUA None None KV884755.1 546073 546133 - M. albus Eumetazoa Unknown 1 1
Xla-Mir-10-P1c3-v2 xla-mir-10a MIR-10 CCCUGUA MIMAT0046422 MIMAT0046423 NC_030740.1 3499573 3499632 - X. laevis Eumetazoa No 1
Xla-Mir-10-P1c4-v2 None MIR-10 CCCUGUA None None NC_030741.1 3133740 3133799 - X. laevis Eumetazoa No 1
Aca-Mir-10-P1d-v2 aca-mir-10c MIR-10 CCCUGUA MIMAT0021721 MIMAT0021722 2 71991632 71991689 - Gnathostomata Eumetazoa No
Ami-Mir-10-P1d-v2 ami-mir-10c MIR-10 CCCUGUA MIMAT0038034 MIMAT0038035 NW_017708254.1 346318 346377 + Gnathostomata Eumetazoa No
Cli-Mir-10-P1d-v2 cli-mir-10c MIR-10 CCCUGUA MIMAT0038408 MIMAT0038409 scaffold922 255117 255176 + Gnathostomata Eumetazoa No
Cmi-Mir-10-P1d-v2 None MIR-10 CCCUGUA None None KI636119.1 284356 284415 + Gnathostomata Eumetazoa No
Cpi-Mir-10-P1d-v2 cpi-mir-10c MIR-10 CCCUGUA MIMAT0037629 MIMAT0037630 JH584844 1020367 1020426 - Gnathostomata Eumetazoa No
Gga-Mir-10-P1d-v2 None MIR-10 CCCUGUA None None None None None None Gnathostomata Eumetazoa No
Gja-Mir-10-P1d-v2 None MIR-10 CCCUGUA None None NW_015167536.1 410035 410092 - Gnathostomata Eumetazoa Unknown
Loc-Mir-10-P1d-v2 None MIR-10 CCCUGUA None None LG4 15933792 15933850 + Gnathostomata Eumetazoa No
Mun-Mir-10-P1d-v2 None MIR-10 CCCUGUA None None 10-P1c-v2_LR594634.1:315264575-315264716 42 101 - Gnathostomata Eumetazoa Unknown
Pbv-Mir-10-P1d-v2 pbv-mir-10b-2 MIR-10 CCCUGUA MIMAT0038826 MIMAT0038828 KE953310.1 36710 36767 + Gnathostomata Eumetazoa No
Xtr-Mir-10-P1d-v2 xtr-mir-10c MIR-10 CCCUGUA MIMAT0003559 None chr2 142821737 142821793 - Gnathostomata Eumetazoa No
Dre-Mir-10-P1d1-v2 dre-mir-10b-2 MIR-10 CCCUGUA MIMAT0001268 MIMAT0031934 chr23 36130017 36130077 + Clupeocephala Eumetazoa Unknown
Gmo-Mir-10-P1d1-v2 gmo-mir-10a-2 MIR-10 CCCUGUA MIMAT0044088 None GeneScaffold_1797 154031 154090 + Clupeocephala Eumetazoa No
Mal-Mir-10-P1d1-v2 None MIR-10 CCCUGUA None None KV884694.1 1805181 1805240 - Clupeocephala Eumetazoa No
Tni-Mir-10-P1d1-v2 tni-mir-10b-1 MIR-10 CCCUGUA MIMAT0002964 None 9 4255307 4255365 + Clupeocephala Eumetazoa Unknown
Xla-Mir-10-P1d3-v2 None MIR-10 CCCUGUA None None NC_030726.1 148240764 148240820 - X. laevis Eumetazoa No
Xla-Mir-10-P1d4-v2 None MIR-10 CCCUGUA None None None None None None X. laevis Eumetazoa No
Lpo-Mir-10-P1k-v1 None MIR-10 CCCUGUA None None NW_013666572.1 345853 345911 + L. polyphemus Eumetazoa No 1
Lpo-Mir-10-P1l-v1 None MIR-10 CCCUGUA None None NW_013665747.1 245823 245879 - L. polyphemus Eumetazoa No
Lpo-Mir-10-P1m-v1 None MIR-10 CCCUGUA None None NW_013666465.1 260670 260726 - L. polyphemus Eumetazoa No
Lpo-Mir-10-P1n-v1 None MIR-10 CCCUGUA None None NW_013668646.1 77832 77889 - L. polyphemus Eumetazoa No 1
Lpo-Mir-10-P1o-v1 None MIR-10 CCCUGUA None None NW_013678333.1 8113 8170 + L. polyphemus Eumetazoa No 1
Pcr-Mir-10-P1o4-v2 None MIR-10 CCCUGUA None None CAJQUW010012264.1 63192 63250 + P. crozeri Eumetazoa No 1
Lpo-Mir-10-P1p-v1 None MIR-10 CCCUGUA None None NW_013668868.1 9884 9943 - L. polyphemus Eumetazoa No
Csc-Mir-10-P1q1-v2 None MIR-10 CCCUGUA None None NW_019384341.1 354570 354628 - C. sculpturatus Eumetazoa No 1
Csc-Mir-10-P1q2-v2 None MIR-10 CCCUGUA None None NW_019384341.1 345313 345371 - C. sculpturatus Eumetazoa No 1
Csc-Mir-10-P1q3-v2 None MIR-10 CCCUGUA None None NW_019384341.1 336262 336320 - C. sculpturatus Eumetazoa No 1
Tur-Mir-10-P1z-v1 tur-mir-10 MIR-10 CCCUGUA MIMAT0023026 MIMAT0023027 HE587320.1 1111621 1111681 + T. urticae Eumetazoa No
Llo-Mir-10-P4-v2 None MIR-10 CCCUGUA None None OU343004.1 4085730 4085788 - Protostomia Eumetazoa No 1
Bta-Mir-2367 bta-mir-2367 MIR-2367 CCCUGUA MIMAT0011909 MIMAT0011910 NC_037349.1 11368936 11368994 + B. taurus B. taurus No 1
Hme-Mir-2756 hme-mir-2756 MIR-2756 CCCUGUA MIMAT0024953 None HE672079 296638 296695 + H. melpomene H. melpomene No 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all