10 20 30
AC-| GCU UGAG U
CCUUAGACGAAUUUGUG CG C
GGGAUCUGCUUAAACGC GC U
UAA^ GCU UGA- C
. 50 40
Deep sequencing
Comment
There is a one nt deletion in the 3p read in the genome sequence relative to what is shown here. However both the read data and phylogenetic conservation suggest that this is the correct sequence.