MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-10-P1d-v1

Family name MIR-10 (all species)
Seed ACCCUGU
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-10-P1b-v1  Mun-Mir-10-P1b-v2  Mun-Mir-10-P1c-v1  Mun-Mir-10-P1c-v2  Mun-Mir-10-P1d-v2  Mun-Mir-10-P2b  Mun-Mir-10-P2c  Mun-Mir-10-P2d  Mun-Mir-10-P3b  Mun-Mir-10-P3c  Mun-Mir-10-P3d 
Orthologues Aae-Mir-10-P1-v1  Aae-Mir-10-P1-v2  Aca-Mir-10-P1d-v1  Aca-Mir-10-P1d-v2  Adi-Mir-10  Aga-Mir-10-P1-v1  Aga-Mir-10-P1-v2  Agr-Mir-10-P1  Ami-Mir-10-P1d-v1  Ami-Mir-10-P1d-v2  Asp-Mir-10  Asu-Mir-10-P1  Bfl-Mir-10-P1-v1  Bfl-Mir-10-P1-v2  Bge-Mir-10-P1-v1  Bge-Mir-10-P1-v2  Bla-Mir-10-P1-v1  Bla-Mir-10-P1-v2  Cbr-Mir-10-P1  Cel-Mir-10-P1  Cli-Mir-10-P1d-v1  Cli-Mir-10-P1d-v2  Cmi-Mir-10-P1d-v1  Cmi-Mir-10-P1d-v2  Cpi-Mir-10-P1d-v1  Cpi-Mir-10-P1d-v2  Cte-Mir-10-P1  Dan-Mir-10-P1  Dgr-Mir-10-P1  Dlo-Mir-10-P1-v1  Dlo-Mir-10-P1-v2  Dma-Mir-10-P1-v1  Dma-Mir-10-P1-v2  Dme-Mir-10-P1  Dmo-Mir-10-P1  Dpu-Mir-10-P1-v1  Dpu-Mir-10-P1-v2  Dre-Mir-10-P1d1-v1  Dre-Mir-10-P1d1-v2  Dsi-Mir-10-P1  Dya-Mir-10-P1  Eba-Mir-10-P1  Efe-Mir-10-P1  Egr-Mir-10-P1  Gga-Mir-10-P1d-v1  Gga-Mir-10-P1d-v2  Gja-Mir-10-P1d-v1  Gja-Mir-10-P1d-v2  Gmo-Mir-10-P1d1-v1  Gmo-Mir-10-P1d1-v2  Gpa-Mir-10-P1  Gsp-Mir-10-P1  Hme-Mir-10-P1-v1  Hme-Mir-10-P1-v2  Hru-Mir-10-P1  Isc-Mir-10-P1-v1  Isc-Mir-10-P1-v2  Lch-Mir-10-P1d  Lgi-Mir-10-P1  Lhy-Mir-10-P1  Llo-Mir-10-P1  Loc-Mir-10-P1d-v1  Loc-Mir-10-P1d-v2  Mal-Mir-10-P1d1-v1  Mal-Mir-10-P1d1-v2  Mgi-Mir-10-P1  Mom-Mir-10-P1  Npo-Mir-10-P1  Nve-Mir-10  Ofu-Mir-10-P1  Pau-Mir-10-P1  Pbv-Mir-10-P1d-v1  Pbv-Mir-10-P1d-v2  Pca-Mir-10-P1  Pdu-Mir-10-P1  Pfl-Mir-10-P1  Pmi-Mir-10-P1  Pve-Mir-10-P1  Rph-Mir-10-P1  Sko-Mir-10-P1  Sma-Mir-10-P1  Snu-Mir-10-P1  Spu-Mir-10-P1  Tca-Mir-10-P1-v1  Tca-Mir-10-P1-v2  Tni-Mir-10-P1d1-v1  Tni-Mir-10-P1d1-v2  War-Mir-10-P1  Xbo-Mir-10-P1  Xla-Mir-10-P1d3-v1  Xla-Mir-10-P1d3-v2  Xla-Mir-10-P1d4-v1  Xla-Mir-10-P1d4-v2  Xtr-Mir-10-P1d-v1  Xtr-Mir-10-P1d-v2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Eumetazoa
Genome context
(Mun_miRNA_loci)		 10-P1c-v2_LR594634.1:315264575-315264716: 41-102 [-]
Precursor
(pre-Mir +30nt flank)
UCAGUUGGAAUACAUCCAGUCGUCUAUAUGCACCCUGUAGAAUCGAAUUUGUGUGAGAAUGUGAGGGUCACAAAUUCGUCUCUAGGGGGGUAUAUGGAUGAUGCCAAAAUUCUGCUUUUUUU
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Structure
        10          20        30        40        50        60 
UCAGUUGGAAUACAUCCA--|            A    G    AU          UGAGAAU 
                    GUCGUCUAUAUGC CCCU UAGA  CGAAUUUGUG       \
                    UAGUAGGUAUAUG GGGG AUCU  GCUUAAACAC       G
UUUUUUUCGUCUUAAAACCG^            -    G    CU          UGGGAGU 
120       110       100        90         80        70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Mun-Mir-10-P1d-v1_5p
mirBase accessionNone
Sequence 
0- CACCCUGUAGAAUCGAAUUUGUG -23
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Star sequence

Mun-Mir-10-P1d-v1_3p* (predicted)
mirBase accessionNone
Sequence 
40- CAAAUUCGUCUCUAGGGGGGUA -62
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