MirGeneDB 3.0

22 microRNA genes with seed AGGUCCA

						Sort by genome coordinates							Motifs
MirGeneDB ID ▲	MiRBase ID	Family	Seed	5p accession	3p accession	Chromosome	Start	End	Strand	Node of origin (locus)	Node of origin (family)	3' NTU	UG	UGUG	CNNC
Aca-Mir-2188	aca-mir-2188	MIR-2188	AGGUCCA	MIMAT0021882	MIMAT0021883	GL343545.1	105074	105134	-	Gnathostomata	Gnathostomata	No			1
Ami-Mir-2188	ami-mir-2188	MIR-2188	AGGUCCA	MIMAT0038333	MIMAT0038334	NW_017709304.1	9754	9813	+	Gnathostomata	Gnathostomata	No
Cli-Mir-2188	cli-mir-2188	MIR-2188	AGGUCCA	MIMAT0038709	MIMAT0038710	scaffold497	1693231	1693290	-	Gnathostomata	Gnathostomata	No
Cmi-Mir-2188	None	MIR-2188	AGGUCCA	None	None	KI636151.1	89377	89436	-	Gnathostomata	Gnathostomata	No
Cpi-Mir-2188	cpi-mir-2188	MIR-2188	AGGUCCA	MIMAT0037943	MIMAT0037944	JH584511	3220744	3220802	-	Gnathostomata	Gnathostomata	No
Dre-Mir-2188	dre-mir-2188	MIR-2188	AGGUCCA	MIMAT0011309	MIMAT0011310	chr5	69021881	69021940	-	Gnathostomata	Gnathostomata	Yes		1	1
Gga-Mir-2188	gga-mir-2188	MIR-2188	AGGUCCA	MIMAT0016372	MIMAT0027028	22	2948515	2948574	-	Gnathostomata	Gnathostomata	No
Gja-Mir-2188	None	MIR-2188	AGGUCCA	None	None	NW_015164186.1	1585193	1585252	+	Gnathostomata	Gnathostomata	Unknown
Gmo-Mir-2188	gmo-mir-2188	MIR-2188	AGGUCCA	MIMAT0044013	MIMAT0044014	contig159248	350	409	-	Gnathostomata	Gnathostomata	No		1	1
Lch-Mir-2188	None	MIR-2188	AGGUCCA	None	None	JH127420.1	655957	656016	+	Gnathostomata	Gnathostomata	Unknown
Loc-Mir-2188	None	MIR-2188	AGGUCCA	None	None	LG1	8279999	8280058	+	Gnathostomata	Gnathostomata	Yes
Mal-Mir-2188	None	MIR-2188	AGGUCCA	None	None	KV884744.1	2550294	2550353	+	Gnathostomata	Gnathostomata	No		1	1
Mun-Mir-2188	None	MIR-2188	AGGUCCA	None	None	2188_LR594635.1:335100677-335100818	42	101	-	Gnathostomata	Gnathostomata	Unknown
Oan-Mir-2188	None	MIR-2188	AGGUCCA	None	None	NC_041732.1	40060949	40061008	-	Gnathostomata	Gnathostomata	No
Pbv-Mir-2188	pbv-mir-2188	MIR-2188	AGGUCCA	MIMAT0039089	MIMAT0039090	KE955095.1	150232	150292	-	Gnathostomata	Gnathostomata	No			1
Spt-Mir-2188	None	MIR-2188	AGGUCCA	None	None	QEPC01010930.1	773536	773595	-	Gnathostomata	Gnathostomata	Unknown
Sto-Mir-2188	None	MIR-2188	AGGUCCA	None	None	BFAA01112839.1	244	303	+	Gnathostomata	Gnathostomata	Unknown			1
Tgu-Mir-2188	tgu-mir-2188	MIR-2188	AGGUCCA	MIMAT0014480	MIMAT0026967	22	177671	177730	+	Gnathostomata	Gnathostomata	No
Tni-Mir-2188	None	MIR-2188	AGGUCCA	None	None	12	6747621	6747680	-	Gnathostomata	Gnathostomata	No		1	1
Xtr-Mir-2188	xtr-mir-2188	MIR-2188	AGGUCCA	MIMAT0012193	None	chr3	120050654	120050711	-	Gnathostomata	Gnathostomata	Yes		1	1
Xla-Mir-2188-P1	None	MIR-2188	AGGUCCA	None	None	NC_030728.1	123489911	123489968	-	X. laevis	Gnathostomata	Unknown		1	1
Xla-Mir-2188-P2	None	MIR-2188	AGGUCCA	None	None	NC_030729.1	22116209	22116266	+	X. laevis	Gnathostomata	Unknown		1	1

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