MirGeneDB 3.0
MirGeneDB ID

Oan-Mir-2188

Family name MIR-2188 (all species)
Seed AGGUCCA
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-2188  Ami-Mir-2188  Cli-Mir-2188  Cmi-Mir-2188  Cpi-Mir-2188  Dre-Mir-2188  Gga-Mir-2188  Gja-Mir-2188  Gmo-Mir-2188  Lch-Mir-2188  Loc-Mir-2188  Mal-Mir-2188  Mdo-Mir-2188  Mun-Mir-2188  Pbv-Mir-2188  Sha-Mir-2188  Spt-Mir-2188  Sto-Mir-2188  Tgu-Mir-2188  Tni-Mir-2188  Xla-Mir-2188-P1  Xla-Mir-2188-P2  Xtr-Mir-2188 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(mOrnAna1.p.v1_plustraces)		 NC_041732.1: 40060949-40061008 [-]
Precursor
(pre-Mir +30nt flank)
UCCAUCCUCAGGAAUAUCAGACCUGUGGGACAGGUCCAAUCUCACAUGUCCUGUAUAGAAUAAAGGGGGAUAUAUGUGGUCAGACCUAUCCCACAGGCCCUGUUCUUCCUGGGCAGAGAC
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Structure
        10         20         30        40        50         
UCCAUCCUCAGGAAUAU-   A-|        C     CA   U  C       GUAUAG 
                  CAG  CCUGUGGGA AGGUC  AUC CA AUGUCCU      A
                  GUC  GGACACCCU UCCAG  UGG GU UAUAGGG      A
CAGAGACGGGUCCUUCUU   CC^        A     AC   U  A       GGAAAU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Br Ce He Ki Te
Mature sequence

Oan-Mir-2188_5p
mirBase accessionNone
Sequence 
0- CAGGUCCAAUCUCACAUGUCCU -22
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Star sequence

Oan-Mir-2188_3p*
mirBase accessionNone
Sequence 
38- GAUAUAUGUGGUCAGACCUAUC -60
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