MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-2188

Family name MIR-2188 (all species)
Seed GCUAUGU
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7245
Paralogues
Orthologues Aca-Mir-2188  Ami-Mir-2188  Cli-Mir-2188  Cmi-Mir-2188  Cpi-Mir-2188  Dre-Mir-2188  Gga-Mir-2188  Gja-Mir-2188  Gmo-Mir-2188  Lch-Mir-2188  Loc-Mir-2188  Mal-Mir-2188  Mun-Mir-2188  Oan-Mir-2188  Pbv-Mir-2188  Sha-Mir-2188  Spt-Mir-2188  Sto-Mir-2188  Tgu-Mir-2188  Tni-Mir-2188  Xla-Mir-2188-P1  Xla-Mir-2188-P2  Xtr-Mir-2188 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(monDom5_add)		 1: 577087573-577087632 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCCAUCUCGGGGAAUAUCAGCCCUAUGGGAAAGGUCCAAUUUUACAUGCCCUGUAUGAAAUAAAAAGGGCUAUGUGUGGUUGGACCUGUCCCACAGGCCCUGUGUUCUUACACAUGCAGA
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Structure
        10         20         30        40         50         
UCCAUCUCGGGGAAUAU-   C-   A     A         UU     -|    GUAUGA 
                  CAG  CCU UGGGA AGGUCCAAU  UACAU GCCCU      \
                  GUC  GGA ACCCU UCCAGGUUG  GUGUA CGGGA      A
AGACGUACACAUUCUUGU   CC   C     G         GU     U^    AAAAUA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
-   +
Br Ce He Ki Te
Star sequence

Mdo-Mir-2188_5p*
mirBase accessionMIMAT0028456
Sequence 
0- AAGGUCCAAUUUUACAUGCCCU -22
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Proposed targets TargetScanVert: mdo-miR-7245-5p
Mature sequence

Mdo-Mir-2188_3p
mirBase accessionMIMAT0028457
Sequence 
37- GGCUAUGUGUGGUUGGACCUGUC -60
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Proposed targets TargetScanVert: mdo-miR-7245-3p