MirGeneDB 3.0
MirGeneDB ID

Pbv-Mir-2188

Family name MIR-2188 (all species)
Seed AGGUCCA
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-2188
Paralogues
Orthologues Aca-Mir-2188  Ami-Mir-2188  Cli-Mir-2188  Cmi-Mir-2188  Cpi-Mir-2188  Dre-Mir-2188  Gga-Mir-2188  Gja-Mir-2188  Gmo-Mir-2188  Lch-Mir-2188  Loc-Mir-2188  Mal-Mir-2188  Mdo-Mir-2188  Mun-Mir-2188  Oan-Mir-2188  Sha-Mir-2188  Spt-Mir-2188  Sto-Mir-2188  Tgu-Mir-2188  Tni-Mir-2188  Xla-Mir-2188-P1  Xla-Mir-2188-P2  Xtr-Mir-2188 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)		 KE955095.1: 150232-150292 [-]
Precursor
(pre-Mir +30nt flank)
UCUACCCUGGGGCAUGUCACACUUGUGGUCAAGGUCCAACCUCAUGUGUCCUGUAUGCAAUGAAAGUGGGAUGCAUGUGGUCAGACCUAGACCACAAGGCCAGUGGCCUCCACCCUACCAU
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Structure
        10        20          30        40        50          
UCUACCCUGGGGCAUGUCACA--|        A     CA   U          GUAUGCA 
                       CUUGUGGUC AGGUC  ACC CAUGUGUCCU       \
                       GAACACCAG UCCAG  UGG GUACGUAGGG       A
UACCAUCCCACCUCCGGUGACCG^        A     AC   U          UGAAAGU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Pbv-Mir-2188_5p
mirBase accessionMIMAT0039089
Sequence 
0- AAGGUCCAACCUCAUGUGUCCU -22
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Star sequence

Pbv-Mir-2188_3p*
mirBase accessionMIMAT0039090
Sequence 
39- GAUGCAUGUGGUCAGACCUAGA -61
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