MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-2188

Family name MIR-2188 (all species)
Seed AGGUCCA
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues
Orthologues Aca-Mir-2188  Ami-Mir-2188  Cli-Mir-2188  Cmi-Mir-2188  Cpi-Mir-2188  Dre-Mir-2188  Gga-Mir-2188  Gja-Mir-2188  Gmo-Mir-2188  Lch-Mir-2188  Loc-Mir-2188  Mal-Mir-2188  Mdo-Mir-2188  Oan-Mir-2188  Pbv-Mir-2188  Sha-Mir-2188  Spt-Mir-2188  Sto-Mir-2188  Tgu-Mir-2188  Tni-Mir-2188  Xla-Mir-2188-P1  Xla-Mir-2188-P2  Xtr-Mir-2188 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(Mun_miRNA_loci)		 2188_LR594635.1:335100677-335100818: 42-101 [-]
Precursor
(pre-Mir +30nt flank)
UCCUUCCUGGAGAAUAUCAGACUUGUGGGAAAGGUCCAACCUCACAUGUCCUGUAUAAAAUAAGGAGGGAUAUAUGUGGUCAGACCUGUCCCACAGGCCUUGUAUUCUUAUAUAGACAUG
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Structure
        10          20        30        40        50         
UCCUUCCUGGAGAAUAUC--| A         A     CA   U  C       GUAUAA 
                    AG CUUGUGGGA AGGUC  ACC CA AUGUCCU      A
                    UC GGACACCCU UCCAG  UGG GU UAUAGGG      A
GUACAGAUAUAUUCUUAUGU^ C         G     AC   U  A       AGGAAU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Mun-Mir-2188_5p
mirBase accessionNone
Sequence 
0- AAGGUCCAACCUCACAUGUCCU -22
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Star sequence

Mun-Mir-2188_3p* (predicted)
mirBase accessionNone
Sequence 
38- GAUAUAUGUGGUCAGACCUGUC -60
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