MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-2188

Family name MIR-2188 (all species)
Seed AGGUCCA
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues
Orthologues Aca-Mir-2188  Ami-Mir-2188  Cli-Mir-2188  Cpi-Mir-2188  Dre-Mir-2188  Gga-Mir-2188  Gja-Mir-2188  Gmo-Mir-2188  Lch-Mir-2188  Loc-Mir-2188  Mal-Mir-2188  Mdo-Mir-2188  Mun-Mir-2188  Oan-Mir-2188  Pbv-Mir-2188  Sha-Mir-2188  Spt-Mir-2188  Sto-Mir-2188  Tgu-Mir-2188  Tni-Mir-2188  Xla-Mir-2188-P1  Xla-Mir-2188-P2  Xtr-Mir-2188 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI636151.1: 89377-89436 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAAGAUCAGAGGAAUAUCAGACCCUUGAGAAAGGUCCAACCUCAUAUGUCCUGUAUUGAUUAAGGUGGGAUGUAUGUGGUCAGACCUAUCCCAGAGGUCAUGUAUUCUUGCAUGCCAGGA
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Structure
        10          20        30        40        50         
UAAGAUCAGAGGAAUAUCA--|   C   A  A     CA   U          GUAUUG 
                     GACC UUG GA AGGUC  ACC CAUAUGUCCU      A
                     CUGG GAC CU UCCAG  UGG GUAUGUAGGG      U
AGGACCGUACGUUCUUAUGUA^   A   C  A     AC   U          UGGAAU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Mature sequence

Cmi-Mir-2188_5p
mirBase accessionNone
Sequence 
0- AAGGUCCAACCUCAUAUGUCCU -22
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Star sequence

Cmi-Mir-2188_3p*
mirBase accessionNone
Sequence 
38- GAUGUAUGUGGUCAGACCUAUC -60
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