MirGeneDB 3.0
MirGeneDB ID

Aca-Mir-460-P2

Family name MIR-460 (all species)
Seed CCUCAUU
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-460b
Paralogues Aca-Mir-460-P1 
Orthologues Ami-Mir-460-P2  Cli-Mir-460-P2  Cpi-Mir-460-P2  Dre-Mir-460-P2  Gga-Mir-460-P2  Gja-Mir-460-P2  Gmo-Mir-460-P2  Lch-Mir-460-P2  Loc-Mir-460-P2  Mal-Mir-460-P2  Mun-Mir-460-P2  Spt-Mir-460-P2  Tgu-Mir-460-P2  Tni-Mir-460-P2a  Tni-Mir-460-P2b  Xla-Mir-460-P2c  Xla-Mir-460-P2d  Xtr-Mir-460-P2 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(anoCar2)		 GL343403.1: 879933-879991 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUGGGAUGCUCCUGCCGGACUCCAUCUUGCCCUCAUUGUACAUGCUGUGUGUAUUCCUUUGGCGUACACAGCGCAUGCAAUGUGGACAGGAGGGAGGCCGAAAGUCGACGGACCAUUA
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Structure
        10          20        30        40        50         
CAUGGGAUGCUCCUGCC--| A    A     C  U       CA         UAUUCC 
                   GG CUCC UCUUG CC CAUUGUA  UGCUGUGUG      \
                   CC GAGG AGGAC GG GUAACGU  GCGACACAU      U
AUUACCAGGCAGCUGAAAG^ G    G     A  U       AC         GCGGUU 
       110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sk Ta Ta To Wh
Mature sequence

Aca-Mir-460-P2_5p
mirBase accessionMIMAT0021972
Sequence 
0- CCCUCAUUGUACAUGCUGUGUG -22
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Star sequence

Aca-Mir-460-P2_3p*
mirBase accessionMIMAT0021973
Sequence 
37- CACAGCGCAUGCAAUGUGGACA -59
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