MirGeneDB 3.0
MirGeneDB ID

Ami-Mir-460-P2

Family name MIR-460 (all species)
Seed CCUCAUU
Species American alligator (Alligator mississippiensis)
MiRBase ID ami-mir-460b
Paralogues Ami-Mir-460-P1 
Orthologues Aca-Mir-460-P2  Cli-Mir-460-P2  Cpi-Mir-460-P2  Dre-Mir-460-P2  Gga-Mir-460-P2  Gja-Mir-460-P2  Gmo-Mir-460-P2  Lch-Mir-460-P2  Loc-Mir-460-P2  Mal-Mir-460-P2  Mun-Mir-460-P2  Spt-Mir-460-P2  Tgu-Mir-460-P2  Tni-Mir-460-P2a  Tni-Mir-460-P2b  Xla-Mir-460-P2c  Xla-Mir-460-P2d  Xtr-Mir-460-P2 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(GCF_000281125.3_ASM28112v4_AMI_add)		 NW_017711293.1: 510502-510560 [+] UCSC
Precursor
(pre-Mir +30nt flank)
UCCGACCUCAGUGGACGUGGCUCUAUGUUGUCCUCAUUGUACAUGCUGUGUGUAUAUUUAUGACGUACACAGCGCAUGCAAUGUGGACAGAAUGGAGACCAGCAGGCUCCGAGACAUCU
Get precursor sequence
Structure
        10         20         30        40        50         
UCCGACCUCAGUGGACG-   -|     G      U       CA         UAUAUU 
                  UGG CUCUAU UUGUCC CAUUGUA  UGCUGUGUG      \
                  ACC GAGGUA GACAGG GUAACGU  GCGACACAU      U
UCUACAGAGCCUCGGACG   A^     A      U       AC         GCAGUA 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ami-Mir-460-P2_5p
mirBase accessionMIMAT0038293
Sequence 
0- UCCUCAUUGUACAUGCUGUGUG -22
Get sequence
Star sequence

Ami-Mir-460-P2_3p*
mirBase accessionMIMAT0038294
Sequence 
37- CACAGCGCAUGCAAUGUGGACA -59
Get sequence