MirGeneDB 3.0
MirGeneDB ID

Cli-Mir-460-P2

Family name MIR-460 (all species)
Seed CCUCAUU
Species Rock pigeon (Columba livia)
MiRBase ID
Paralogues Cli-Mir-460-P1 
Orthologues Aca-Mir-460-P2  Ami-Mir-460-P2  Cpi-Mir-460-P2  Dre-Mir-460-P2  Gga-Mir-460-P2  Gja-Mir-460-P2  Gmo-Mir-460-P2  Lch-Mir-460-P2  Loc-Mir-460-P2  Mal-Mir-460-P2  Mun-Mir-460-P2  Spt-Mir-460-P2  Tgu-Mir-460-P2  Tni-Mir-460-P2a  Tni-Mir-460-P2b  Xla-Mir-460-P2c  Xla-Mir-460-P2d  Xtr-Mir-460-P2 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(colLiv2)		 scaffold72: 1902296-1902352 [+]
Precursor
(pre-Mir +30nt flank)
UUGUGACCUCUCUGCUCUGGCUCUAUAGUGUCCUCAUUGUACAUGCUGUGUGUAUUUGUCACGUACACAGCGCAUGCAAUGUGGACAUAAUGGAGCUCAAUUUACACCUGAUAAGGA
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Structure
        10          20        30        40        50        
UUGUGACCUCUCUGCUC-  -|      A      U       CA         UAUUU 
                  UG GCUCUAU GUGUCC CAUUGUA  UGCUGUGUG     \
                  AC CGAGGUA UACAGG GUAACGU  GCGACACAU     G
AGGAAUAGUCCACAUUUA  U^      A      U       AC         GCACU 
     110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Li Mi Ov Pe Te To
Mature sequence

Cli-Mir-460-P2_5p
mirBase accessionNone
Sequence 
0- UCCUCAUUGUACAUGCUGUGUG -22
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Star sequence

Cli-Mir-460-P2_3p*
mirBase accessionNone
Sequence 
35- CACAGCGCAUGCAAUGUGGACA -57
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