MirGeneDB 3.0
MirGeneDB ID

Tgu-Mir-460-P2

Family name MIR-460 (all species)
Seed CCUCAUU
Species Zebra finch (Taeniopygia guttata)
MiRBase ID tgu-mir-460b
Paralogues Tgu-Mir-460-P1 
Orthologues Aca-Mir-460-P2  Ami-Mir-460-P2  Cli-Mir-460-P2  Cpi-Mir-460-P2  Dre-Mir-460-P2  Gga-Mir-460-P2  Gja-Mir-460-P2  Gmo-Mir-460-P2  Lch-Mir-460-P2  Loc-Mir-460-P2  Mal-Mir-460-P2  Mun-Mir-460-P2  Spt-Mir-460-P2  Tni-Mir-460-P2a  Tni-Mir-460-P2b  Xla-Mir-460-P2c  Xla-Mir-460-P2d  Xtr-Mir-460-P2 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(TaeGut1_add)		 4A: 19418272-19418328 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUGUGACCUCUCCACUGUGGCUCUAUCGUGCCCUCAUUGUACAUGCUGUGUGAAUUUGUCACAUACACAGCGCAUGCAAUGUGGACAUAAUGGAGCUCAAUGGCCACCUGAGGAUAG
Get precursor sequence
Structure
        10          20        30        40        50        
UUGUGACCUCUCCACUG-  -|      CG  C  U       CA         AAUUU 
                  UG GCUCUAU  UG CC CAUUGUA  UGCUGUGUG     \
                  AC CGAGGUA  AC GG GUAACGU  GCGACACAU     G
GAUAGGAGUCCACCGGUA  U^      AU  A  U       AC         ACACU 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
CommentThere are mutliple Dicer cuts on the 3p arm.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma Ma
Mature sequence

Tgu-Mir-460-P2_5p
mirBase accessionMIMAT0014476
Sequence 
0- CCCUCAUUGUACAUGCUGUGUG -22
Get sequence
Star sequence

Tgu-Mir-460-P2_3p*
mirBase accessionMIMAT0014624
Sequence 
35- CACAGCGCAUGCAAUGUGGACA -57
Get sequence