MirGeneDB 3.0
MirGeneDB ID

Asu-Mir-36-o32

Family name MIR-36 (all species)
Seed CACCGGG
Species Large roundworm (Ascaris suum)
MiRBase ID asu-mir-5348
Paralogues Asu-Mir-36-o27  Asu-Mir-36-o28  Asu-Mir-36-o29-v1  Asu-Mir-36-o29-v2  Asu-Mir-36-o30  Asu-Mir-36-o31 
Orthologues Agr-Mir-36  Bge-Mir-36  Cte-Mir-36  Dgr-Mir-36  Dlo-Mir-36  Dma-Mir-36  Dpu-Mir-36  Eba-Mir-36  Gsp-Mir-36  Isc-Mir-36  Lhy-Mir-36  Llo-Mir-36  Mgi-Mir-36  Mom-Mir-36  Npo-Mir-36  Ofu-Mir-36  Pau-Mir-36  Pcr-Mir-36  Pdu-Mir-36  Pve-Mir-36  Rph-Mir-36  Snu-Mir-36  Tca-Mir-36  Tur-Mir-36-P32  War-Mir-36 
Node of Origin (locus) A.suum
Node of Origin (family) Protostomia
Genome context
(ASU_PRJNA80881_plustraces)		 Scaffold123: 289846-289901 [-]
Clustered miRNAs
(< 50kb from Mir-36-o32)		 Mir-5350-P4 Scaffold123: 289536-289593 [-]
Mir-36-o32 Scaffold123: 289846-289901 [-]
Precursor
(pre-Mir +30nt flank)
AUUAUCAGUAUCAUUUCGCUAGGUACGUGACAGAAGUUGAGUCUAGUUGAGACUGAUAUGUUUCUCACCGGGCAACAACUUCUGUCUCGUGGUAGUAGCUGACGUCAAAUCUAGCC
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Structure
        10           20        30        40         50       
AUUAUCAGUAUCAUUUC---|   GG    U           A-   UA  U    CUGA 
                    GCUA  UACG GACAGAAGUUG  GUC  GU GAGA    U
                    UGAU  GUGC CUGUCUUCAAC  CGG  CA CUCU    A
CCGAUCUAAACUGCAGUCGA^   G-    U           AA   GC  -    UUGU 
    110       100         90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ce Em Em Em Em Em Em Em Em Em Em La Ov Se Sp Te Zy
Star sequence

Asu-Mir-36-o32_5p*
mirBase accessionMIMAT0021548
Sequence 
0- CAGAAGUUGAGUCUAGUUGAGA -22
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Mature sequence

Asu-Mir-36-o32_3p
mirBase accessionMIMAT0021549
Sequence 
34- UCACCGGGCAACAACUUCUGUC -56
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