MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-330-v1

Family name MIR-330 (all species)
Seed CUCUGGG
Species Cow (Bos taurus)
MiRBase ID bta-mir-330
Paralogues Bta-Mir-330-v2 
Orthologues Cfa-Mir-330  Cja-Mir-330-v1  Cpo-Mir-330-v1  Dno-Mir-330-v1  Eca-Mir-330-v1  Ete-Mir-330-v1  Hsa-Mir-330-v1  Laf-Mir-330  Mml-Mir-330-v1  Mmr-Mir-330-v1  Mmu-Mir-330-v1  Ocu-Mir-330-v1  Pab-Mir-330-v1  Rno-Mir-330-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037345.1: 53226516-53226579 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-330-v1)		 Mir-330-v1 NC_037345.1: 53226516-53226579 [-] UCSC Ensembl
Mir-330-v2 NC_037345.1: 53226516-53226579 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGUGCUGUGUGAUCUUCGGCGAUCACUGCCUCUCUGGGCCUGUGUCUUAGGCUCUGCAAGAUCAACCGAGCAAAGCACACGGCCUGCAGAGAGGCAGCGCUCAGCUCCUUACUCGCCCCCAACC
Get precursor sequence
Structure
        10              20        30          40         50        60 
CGUGCUGUGUGAUCUUC------|   AUCA           --    -    U   AG   CUGCAAG 
                       GGCG    CUGCCUCUCUG  GGCC UGUG CUU  GCU       \
                       UCGC    GACGGAGAGAC  CCGG ACAC GAA  CGA       A
CCAACCCCCGCUCAUUCCUCGAC^   ----           GU    C    -   A-   GCCAACU 
  120       110       100            90        80          70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-330-v1_5p
mirBase accessionNone
Sequence 
0- UCUCUGGGCCUGUGUCUUAGGCU -23
Get sequence
Star sequence

Bta-Mir-330-v1_3p*
mirBase accessionMIMAT0009290
Sequence 
40- CAAAGCACACGGCCUGCAGAGAGG -64
Get sequence
Proposed targets TargetScanVert: bta-miR-330