MirGeneDB 3.0
MirGeneDB ID

Mml-Mir-330-v1

Family name MIR-330 (all species)
Seed CUCUGGG
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-330
Paralogues Mml-Mir-330-v2 
Orthologues Bta-Mir-330-v1  Cfa-Mir-330  Cja-Mir-330-v1  Cpo-Mir-330-v1  Dno-Mir-330-v1  Eca-Mir-330-v1  Ete-Mir-330-v1  Hsa-Mir-330-v1  Laf-Mir-330  Mmr-Mir-330-v1  Mmu-Mir-330-v1  Ocu-Mir-330-v1  Pab-Mir-330-v1  Rno-Mir-330-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_003339765.3_Mmul_10_traces)		 CM014354.1: 45708832-45708895 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-330-v1)		 Mir-330-v1 CM014354.1: 45708832-45708895 [-] UCSC Ensembl
Mir-330-v2 CM014354.1: 45708832-45708895 [-] UCSC Ensembl
Mir-642 CM014354.1: 45741685-45741741 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUGCUGUGUGAUCUUUGGCGAUCACUGCCUCUCUGGGCCUGUGUCUUAGGCUCUGCAAGAUCAACCGAGCAAAGCACACGGCCUGCAGAGAGGCAGCGCUCUGCCCCUUACUCGGCCCCGUUU
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Structure
        10         20         30          40         50        60 
CAUGCUGUGUGAUCUUU-   -  UCA           --    -|   U   AG   CUGCAAG 
                  GGC GA   CUGCCUCUCUG  GGCC UGUG CUU  GCU       \
                  CCG CU   GACGGAGAGAC  CCGG ACAC GAA  CGA       A
UUUGCCCCGGCUCAUUCC   U  CGC           GU    C^   -   A-   GCCAACU 
  120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-330-v1_5p
mirBase accessionMIMAT0006270
Sequence 
0- UCUCUGGGCCUGUGUCUUAGGCU -23
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Proposed targets TargetScanVert: mml-miR-330-5p
Star sequence

Mml-Mir-330-v1_3p*
mirBase accessionMIMAT0006271
Sequence 
40- CAAAGCACACGGCCUGCAGAGAGG -64
Get sequence
Proposed targets TargetScanVert: mml-miR-330-3p