MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-875

Family name MIR-875 (all species)
Seed AUACCUC
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues
Orthologues Aca-Mir-875  Ami-Mir-875  Bta-Mir-875  Cfa-Mir-875  Cja-Mir-875  Cli-Mir-875  Cpi-Mir-875  Eca-Mir-875  Ete-Mir-875  Gja-Mir-875  Hsa-Mir-875  Laf-Mir-875  Mdo-Mir-875  Mml-Mir-875  Mmr-Mir-875  Mmu-Mir-875  Mun-Mir-875  Oan-Mir-875  Ocu-Mir-875  Pab-Mir-875  Pbv-Mir-875  Pma-Mir-875  Rno-Mir-875  Sha-Mir-875  Spt-Mir-875 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02009683.1: 3652937-3652996 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGGAGAGCGCAUUCCUAACUGACCGAGGCAAUACCUCAGAAUUGUCAGGACGUCCGUUACUCUAACGCCUGACAGCUCUGAGGUGUCGUCCCGGCGGUCACAUCCCAGCACCACGGCCC
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Structure
        10           20        30        40        50          
UGGGAGAGCGCAUUCCUA---|   A   A   A          A        A GUCCGUU 
                     ACUG CCG GGC AUACCUCAGA UUGUCAGG C       \
                     UGGC GGC CUG UGUGGAGUCU GACAGUCC G       A
CCCGGCACCACGACCCUACAC^   -   C   C          C        - CAAUCUC 
.       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ebu-Mir-875_5p
mirBase accessionNone
Sequence 
0- AAUACCUCAGAAUUGUCAGGAC -22
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Star sequence

Ebu-Mir-875_3p*
mirBase accessionNone
Sequence 
38- CCUGACAGCUCUGAGGUGUCGU -60
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