MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-875

Family name MIR-875 (all species)
Seed AUACCUC
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Aca-Mir-875  Ami-Mir-875  Bta-Mir-875  Cfa-Mir-875  Cja-Mir-875  Cli-Mir-875  Cpi-Mir-875  Ebu-Mir-875  Eca-Mir-875  Gja-Mir-875  Hsa-Mir-875  Laf-Mir-875  Mdo-Mir-875  Mml-Mir-875  Mmr-Mir-875  Mmu-Mir-875  Mun-Mir-875  Oan-Mir-875  Ocu-Mir-875  Pab-Mir-875  Pbv-Mir-875  Pma-Mir-875  Rno-Mir-875  Sha-Mir-875  Spt-Mir-875 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(echTel2)		 JH980295: 39471414-39471470 [+] UCSC
Precursor
(pre-Mir +30nt flank)
UUUUGUAACAUGUUUACGGUUUGGUGGUACUAUACCUCAGCUUUAUCAGGUGUUCUUUAUAAUCACCUGGAAAUACUGAGGUUGAGUUUCACUGAACAUGAGCUUCAUGAUUUCUGU
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Structure
        10          20        30        40        50        
UUUUGUAACAUGUUUACG--|  UG    U   AU       CU  A       UUCUU 
                    GUU  GUGG ACU  ACCUCAG  UU UCAGGUG     \
                    CAA  CACU UGA  UGGAGUC  AA GGUCCAC     U
UGUCUUUAGUACUUCGAGUA^  GU    U   GU       AU  A       UAAUA 
     110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ete-Mir-875_5p (predicted)
mirBase accessionNone
Sequence 
0- UAUACCUCAGCUUUAUCAGGUG -22
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Star sequence

Ete-Mir-875_3p* (predicted)
mirBase accessionNone
Sequence 
35- CCUGGAAAUACUGAGGUUGAGU -57
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