MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-1247-v1

Family name MIR-1247 (all species)
Seed CCCGUCC
Species Horse (Equus caballus)
MiRBase ID
Paralogues Eca-Mir-1247-v2 
Orthologues Bta-Mir-1247-v1  Cfa-Mir-1247  Cja-Mir-1247  Cpo-Mir-1247  Dno-Mir-1247  Ete-Mir-1247  Hsa-Mir-1247  Laf-Mir-1247  Mml-Mir-1247  Mmr-Mir-1247  Mmu-Mir-1247  Ocu-Mir-1247  Pab-Mir-1247  Rno-Mir-1247 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009171.1: 43798914-43798971 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCGCACGGCGCGGCCCCGGCCGCCGGGCGCACCCGUCCCGUGCGUCCCCGGACGUUGCUCUCUGCCCCGGGAACGUCGAGACUGGAGCGCCCGAGCUGAGCCACCUUCGCCGACCCCG
Get precursor sequence
Structure
        10        20          30        40        50         
UCGCACGGCGCGGCCCCGGCC-  -|      A  C   C  U    C     ACGUUGC 
                      GC CGGGCGC CC GUC CG GCGU CCCGG       \
                      CG GCCCGCG GG CAG GC UGCA GGGCC       U
GCCCCAGCCGCUUCCACCGAGU  A^      A  U   A  -    A     CCGUCUC 
      110       100        90        80         70        60
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Mature sequence

Eca-Mir-1247-v1_5p
mirBase accessionNone
Sequence 
0- ACCCGUCCCGUGCGUCCCCGGA -22
Get sequence
Star sequence

Eca-Mir-1247-v1_3p*
mirBase accessionNone
Sequence 
37- CGGGAACGUCGAGACUGGAGC -58
Get sequence