MirGeneDB ID | Mmr-Mir-1247 |
Family name |
MIR-1247 (all species) |
Seed |
CCCGUCC |
Species |
Gray mouse lemur (Microcebus murinus) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-1247-v1
Bta-Mir-1247-v2
Cfa-Mir-1247
Cja-Mir-1247
Cpo-Mir-1247
Dno-Mir-1247
Eca-Mir-1247-v1
Eca-Mir-1247-v2
Ete-Mir-1247
Hsa-Mir-1247
Laf-Mir-1247
Mml-Mir-1247
Mmu-Mir-1247
Ocu-Mir-1247
Pab-Mir-1247
Rno-Mir-1247
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_000165445.3_Mmur_3.0_genomic) |
CM007663.1: 13196251-13196308 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UCGCCCAGCGCAGCCCCGGCCGCCGGGCGCACCCGUCCCGUUCGUCCCCGGACGUUGCUCUCUGCCCCGGGAACGUCGAGACUGGAGCGCCCGAACUGAGCCACCUUCGUGGACCCCG
Get precursor sequence
|
Structure | 10 20 30 40 50
UCGCCCAGCGCAGCCCCGGCCGC--| A C C UU C ACGUUGC
CGGGCGC CC GUC CG CGU CCCGG \
GCCCGCG GG CAG GC GCA GGGCC U
GCCCCAGGUGCUUCCACCGAGUCAA^ A U A U- A CCGUCUC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Mmr-Mir-1247_5p |
mirBase accession | None |
Sequence |
0- ACCCGUCCCGUUCGUCCCCGGA -22
Get sequence
|
Star sequence |
Mmr-Mir-1247_3p* |
mirBase accession | None |
Sequence |
37- CGGGAACGUCGAGACUGGAGC -58
Get sequence
|