MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-1247

Family name MIR-1247 (all species)
Seed CCCGUCC
Species Dog (Canis familiaris)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1247-v1  Bta-Mir-1247-v2  Cja-Mir-1247  Cpo-Mir-1247  Dno-Mir-1247  Eca-Mir-1247-v1  Eca-Mir-1247-v2  Ete-Mir-1247  Hsa-Mir-1247  Laf-Mir-1247  Mml-Mir-1247  Mmr-Mir-1247  Mmu-Mir-1247  Ocu-Mir-1247  Pab-Mir-1247  Rno-Mir-1247 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 WIGL01005664.1: 610-667 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCGCCCGGCGCAGCCCCGGCCGCCGGGCGCACCCGUCCCGUGCGUCCCCGGACGUUGCUCUCUGCCCCGGGAACGUCGAGACUGGAGCGCCCGAGCUGAGCCACCUUCGCCGACCCCG
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Structure
        10        20          30        40        50         
UCGCCCGGCGCAGCCCCGGCC-  -|      A  C   C  U    C     ACGUUGC 
                      GC CGGGCGC CC GUC CG GCGU CCCGG       \
                      CG GCCCGCG GG CAG GC UGCA GGGCC       U
GCCCCAGCCGCUUCCACCGAGU  A^      A  U   A  -    A     CCGUCUC 
      110       100        90        80         70        60
Deep sequencing
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CommentNot in assembly but in trace archives.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-1247_5p
mirBase accessionNone
Sequence 
0- ACCCGUCCCGUGCGUCCCCGGA -22
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Co-mature sequence

Cfa-Mir-1247_3p
mirBase accessionNone
Sequence 
37- CGGGAACGUCGAGACUGGAGC -58
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