MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-1247

Family name MIR-1247 (all species)
Seed CCCGUCC
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-1247
Paralogues
Orthologues Bta-Mir-1247-v1  Bta-Mir-1247-v2  Cfa-Mir-1247  Cja-Mir-1247  Cpo-Mir-1247  Dno-Mir-1247  Eca-Mir-1247-v1  Eca-Mir-1247-v2  Ete-Mir-1247  Hsa-Mir-1247  Laf-Mir-1247  Mml-Mir-1247  Mmr-Mir-1247  Mmu-Mir-1247  Ocu-Mir-1247  Pab-Mir-1247 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 chr6: 134626107-134626164 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCGCCCGGCGCAGUCCCGGCCGCCGGGCGCACCCGUCCCGUUCGUCCCCGGACGUUGCUCUCUGCCCCGGGAACGUCGAGACUGGAGCGCCCGAACUGAGCCACCUUCGCGAACCCGG
Get precursor sequence
Structure
        10        20          30        40        50         
UCGCCCGGCGCAGUCCCGGCCGC--|      A  C   C  UU   C     ACGUUGC 
                         CGGGCGC CC GUC CG  CGU CCCGG       \
                         GCCCGCG GG CAG GC  GCA GGGCC       U
GGCCCAAGCGCUUCCACCGAGUCAA^      A  U   A  U-   A     CCGUCUC 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
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Mature sequence

Rno-Mir-1247_5p
mirBase accessionMIMAT0035721
Sequence 
0- ACCCGUCCCGUUCGUCCCCGGA -22
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Proposed targets TargetScanVert: rno-miR-1247-5p
miRDB: MIMAT0035721
Star sequence

Rno-Mir-1247_3p*
mirBase accessionMIMAT0035722
Sequence 
37- CGGGAACGUCGAGACUGGAGC -58
Get sequence
Proposed targets TargetScanVert: rno-miR-1247-3p
miRDB: MIMAT0035722