MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-1247

Family name MIR-1247 (all species)
Seed CCCGUCC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-1247
Paralogues
Orthologues Bta-Mir-1247-v1  Bta-Mir-1247-v2  Cfa-Mir-1247  Cja-Mir-1247  Cpo-Mir-1247  Dno-Mir-1247  Eca-Mir-1247-v1  Eca-Mir-1247-v2  Ete-Mir-1247  Laf-Mir-1247  Mml-Mir-1247  Mmr-Mir-1247  Mmu-Mir-1247  Ocu-Mir-1247  Pab-Mir-1247  Rno-Mir-1247 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)
chr14: 101560326-101560383 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCGCCCAGCGCAGCCCCGGCCGCUGGGCGCACCCGUCCCGUUCGUCCCCGGACGUUGCUCUCUACCCCGGGAACGUCGAGACUGGAGCGCCCGAACUGAGCCACCUUCGCGGACCCCG
Get precursor sequence
Structure
        10        20          30        40        50         
UCGCCCAGCGCAGCCCCGGCCGC--|      A  C   C  UU   C     ACGUUGC 
                         UGGGCGC CC GUC CG  CGU CCCGG       \
                         GCCCGCG GG CAG GC  GCA GGGCC       U
GCCCCAGGCGCUUCCACCGAGUCAA^      A  U   A  U-   A     CCAUCUC 
      110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-1247_5p

mirBase accessionMIMAT0005899
Sequence
0- ACCCGUCCCGUUCGUCCCCGGA -22
Get sequence
Proposed targets microrna.org: MIMAT0005899
TargetScanVert: hsa-miR-1247-5p
TargetMiner: hsa-miR-1247-5p
miRDB: MIMAT0005899
Star sequence

Hsa-Mir-1247_3p*

mirBase accessionMIMAT0022721
Sequence
37- CGGGAACGUCGAGACUGGAGC -58
Get sequence
Proposed targets TargetScanVert: hsa-miR-1247-3p
TargetMiner: hsa-miR-1247-3p
miRDB: MIMAT0022721