MirGeneDB ID | Mml-Mir-1247 |
Family name |
MIR-1247 (all species) |
Seed |
CCCGUCC |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-1247
|
Paralogues |
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Orthologues |
Bta-Mir-1247-v1
Bta-Mir-1247-v2
Cfa-Mir-1247
Cja-Mir-1247
Cpo-Mir-1247
Dno-Mir-1247
Eca-Mir-1247-v1
Eca-Mir-1247-v2
Ete-Mir-1247
Hsa-Mir-1247
Laf-Mir-1247
Mmr-Mir-1247
Mmu-Mir-1247
Ocu-Mir-1247
Pab-Mir-1247
Rno-Mir-1247
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014342.1: 163783644-163783701 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UCGCCCAGCGCAGCCCCGGCCGCUGGGCGCACCCGUCCCGUUCGUCCCCGGACGUUGCUCUCUACCCCGGGAACGUCGAGACUGGAGCGCCCGAACUGAGCCACCUUCGCGGACCCCG
Get precursor sequence
|
Structure | 10 20 30 40 50
UCGCCCAGCGCAGCCCCGGCCGC--| A C C UU C ACGUUGC
UGGGCGC CC GUC CG CGU CCCGG \
GCCCGCG GG CAG GC GCA GGGCC U
GCCCCAGGCGCUUCCACCGAGUCAA^ A U A U- A CCAUCUC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Mature sequence |
Mml-Mir-1247_5p |
mirBase accession | MIMAT0028358 |
Sequence |
0- ACCCGUCCCGUUCGUCCCCGGA -22
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-1247-5p
|
Star sequence |
Mml-Mir-1247_3p* |
mirBase accession | MIMAT0028359 |
Sequence |
37- CGGGAACGUCGAGACUGGAGC -58
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-1247-3p
|