MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-1247

Family name MIR-1247 (all species)
Seed CCCGUCC
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-1247
Paralogues
Orthologues Bta-Mir-1247-v1  Bta-Mir-1247-v2  Cfa-Mir-1247  Cja-Mir-1247  Dno-Mir-1247  Eca-Mir-1247-v1  Eca-Mir-1247-v2  Ete-Mir-1247  Hsa-Mir-1247  Laf-Mir-1247  Mml-Mir-1247  Mmr-Mir-1247  Mmu-Mir-1247  Ocu-Mir-1247  Pab-Mir-1247  Rno-Mir-1247 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_111: 1834425-1834482 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CUCGCCCGCGCAGCCCCGGCCGCCGGGCGCACCCGUCCCGUUCGUCCCCGGACGUUGCUCUGGGCCCCGGGAGCGUCGAGACUGGAGCGCCCGAACGCAGCCACCUUCGCGGACCCGA
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Structure
        10          20        30        40        50         
CUCGCCCGCGCAGCCCCG--| CGC       A  C   C  UU  UC     ACGUUGC 
                    GC   CGGGCGC CC GUC CG  CG  CCCGG       \
                    CG   GCCCGCG GG CAG GC  GC  GGGCC       U
AGCCCAGGCGCUUCCACCGA^ CAA       A  U   A  U-  GA     CCGGGUC 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-1247_5p
mirBase accessionMIMAT0047405
Sequence 
0- ACCCGUCCCGUUCGUCCCCGGA -22
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Star sequence

Cpo-Mir-1247_3p*
mirBase accessionMIMAT0047406
Sequence 
37- CGGGAGCGUCGAGACUGGAGC -58
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