MirGeneDB 2.1
MirGeneDB ID

Gga-Mir-8-P3a

Family name MIR-8 (all species)
Seed AAUACUG
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-429
Paralogues Gga-Mir-8-P1a  Gga-Mir-8-P2a 
Orthologues Aae-Mir-8  Aca-Mir-8-P3a  Ami-Mir-8-P3a  Asu-Mir-8  Bfl-Mir-8-P3  Bge-Mir-8  Bla-Mir-8-P3  Bpl-Mir-8  Bta-Mir-8-P3a  Cbr-Mir-8  Cel-Mir-8  Cfa-Mir-8-P3a  Cgi-Mir-8  Cli-Mir-8-P3a  Cmi-Mir-8-P3a  Cpi-Mir-8-P3a  Cpo-Mir-8-P3a  Csc-Mir-8  Cte-Mir-8  Dan-Mir-8  Dma-Mir-8  Dme-Mir-8  Dmo-Mir-8  Dno-Mir-8-P3a  Dpu-Mir-8  Dre-Mir-8-P3a  Dsi-Mir-8  Dya-Mir-8  Esc-Mir-8  Ete-Mir-8-P3a  Gja-Mir-8-P3a  Gmo-Mir-8-P3a  Hme-Mir-8  Hsa-Mir-8-P3a  Isc-Mir-8  Lan-Mir-8  Lch-Mir-8-P3a  Lgi-Mir-8  Loc-Mir-8-P3a  Mal-Mir-8-P3a  Mdo-Mir-8-P3a  Mml-Mir-8-P3a  Mmu-Mir-8-P3a  Mun-Mir-8-P3a  Npo-Mir-8  Oan-Mir-8-P3a  Obi-Mir-8  Ocu-Mir-8-P3a  Ovu-Mir-8  Pbv-Mir-8-P3a  Pfl-Mir-8  Pmi-Mir-8  Rno-Mir-8-P3a  Sha-Mir-8-P3a  Sko-Mir-8  Spt-Mir-8-P3a  Spu-Mir-8  Sto-Mir-8-P3a  Tca-Mir-8  Tni-Mir-8-P3a  Xla-Mir-8-P3a1  Xla-Mir-8-P3a2  Xtr-Mir-8-P3a 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(Gallus_gallus.GRCg6a)		 21: 2598575-2598633 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-8-P3a)		 Mir-8-P3a 21: 2598575-2598633 [-] UCSC Ensembl
Mir-8-P2a 21: 2601082-2601142 [-] UCSC Ensembl
Mir-8-P1a 21: 2603411-2603470 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCCUUUAGCCUGAGCGCCUGCUGAUUGCUGUCUUACCAGGCAAAGUUAGAUCUAGCUAUUUCUGUCUAAUACUGUCUGGUAAUGCCGUCAAUCGCAUGGGCAAAAGUCUUCGCCUUGA
Get precursor sequence
Structure
        10           20         30        40        50        
UUCCUUUAGCCUGAGCG--  -|  U     - U  C          AA      UCUAGC 
                   CC UGC GAUUG C GU UUACCAGGCA  GUUAGA      U
                   GG ACG CUAAC G CG AAUGGUCUGU  UAAUCU      A
AGUUCCGCUUCUGAAAACG  U^  -     U C  U          CA      GUCUUU 
       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Ch He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-8-P3a_5p*
mirBase accessionMIMAT0026635
Sequence 
0- GUCUUACCAGGCAAAGUUAGA -21
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Proposed targets TargetScanVert: gga-miR-429-5p
miRDB: MIMAT0026635
Mature sequence

Gga-Mir-8-P3a_3p
mirBase accessionMIMAT0003371
Sequence 
37- UAAUACUGUCUGGUAAUGCCGU -59
Get sequence
Proposed targets TargetScanVert: gga-miR-429-3p
miRDB: MIMAT0003371